Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Six5P70178 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Six5P70178 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Six5P70178 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Six5P70178 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.57■□□□□ 0.08
Six5P70178 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.57■□□□□ 0.08
Six5P70178 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Six5P70178 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.57■□□□□ 0.08
Six5P70178 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.57■□□□□ 0.08
Six5P70178 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Six5P70178 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Six5P70178 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Six5P70178 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Six5P70178 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Six5P70178 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Six5P70178 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Six5P70178 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Six5P70178 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.57■□□□□ 0.08
Six5P70178 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Six5P70178 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Six5P70178 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Six5P70178 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Six5P70178 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Six5P70178 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Six5P70178 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Six5P70178 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
Six5P70178 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.56■□□□□ 0.08
Six5P70178 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Six5P70178 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Six5P70178 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Six5P70178 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Six5P70178 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Six5P70178 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Six5P70178 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Six5P70178 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Six5P70178 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Six5P70178 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Six5P70178 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Six5P70178 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Six5P70178 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Six5P70178 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Six5P70178 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Six5P70178 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Six5P70178 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Six5P70178 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Six5P70178 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Six5P70178 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Six5P70178 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Six5P70178 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Six5P70178 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.55■□□□□ 0.08
Six5P70178 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Six5P70178 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Six5P70178 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Six5P70178 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Six5P70178 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Six5P70178 Gm26039-201ENSMUST00000158152 144 ntBASIC15.55■□□□□ 0.08
Six5P70178 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Six5P70178 Gm27389-201ENSMUST00000183622 195 ntBASIC15.55■□□□□ 0.08
Six5P70178 Gm18101-201ENSMUST00000215769 548 ntBASIC15.55■□□□□ 0.08
Six5P70178 Gm18032-201ENSMUST00000222541 538 ntBASIC15.55■□□□□ 0.08
Six5P70178 Gm9987-201ENSMUST00000069768 567 ntBASIC15.55■□□□□ 0.08
Six5P70178 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Six5P70178 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Six5P70178 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Six5P70178 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Six5P70178 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Six5P70178 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Six5P70178 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Six5P70178 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Six5P70178 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Six5P70178 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Six5P70178 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Six5P70178 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Six5P70178 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Six5P70178 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Six5P70178 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Six5P70178 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Six5P70178 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Six5P70178 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Six5P70178 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Six5P70178 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Six5P70178 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Six5P70178 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Six5P70178 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Six5P70178 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Six5P70178 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.54■□□□□ 0.08
Six5P70178 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Six5P70178 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Six5P70178 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.54■□□□□ 0.08
Six5P70178 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Six5P70178 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Six5P70178 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.54■□□□□ 0.08
Six5P70178 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Six5P70178 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Six5P70178 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Six5P70178 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Six5P70178 Phf7-203ENSMUST00000226565 1971 ntBASIC15.53■□□□□ 0.08
Six5P70178 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.53■□□□□ 0.08
Six5P70178 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Six5P70178 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms