Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Gm8503-201ENSMUST00000118131 455 ntBASIC9.92□□□□□ -0.82
Rps28P62858 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Rps28P62858 Gm37728-201ENSMUST00000195025 2292 ntBASIC9.92□□□□□ -0.82
Rps28P62858 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Rps28P62858 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rps28P62858 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Rps28P62858 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rps28P62858 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rps28P62858 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC9.92□□□□□ -0.82
Rps28P62858 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rps28P62858 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Rps28P62858 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rps28P62858 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC9.92□□□□□ -0.82
Rps28P62858 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Rps28P62858 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rps28P62858 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rps28P62858 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rps28P62858 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Rps28P62858 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rps28P62858 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Rps28P62858 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Rps28P62858 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rps28P62858 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rps28P62858 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rps28P62858 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Rps28P62858 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
Rps28P62858 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rps28P62858 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rps28P62858 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Rps28P62858 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rps28P62858 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC9.91□□□□□ -0.82
Rps28P62858 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rps28P62858 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rps28P62858 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Rps28P62858 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rps28P62858 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rps28P62858 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Rps28P62858 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rps28P62858 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rps28P62858 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Rps28P62858 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC9.91□□□□□ -0.82
Rps28P62858 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rps28P62858 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Rps28P62858 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rps28P62858 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC9.91□□□□□ -0.82
Rps28P62858 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Rps28P62858 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Rps28P62858 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
Rps28P62858 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rps28P62858 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rps28P62858 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
Rps28P62858 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC9.91□□□□□ -0.82
Rps28P62858 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rps28P62858 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Rps28P62858 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rps28P62858 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rps28P62858 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rps28P62858 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rps28P62858 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Rps28P62858 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rps28P62858 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rps28P62858 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC9.91□□□□□ -0.82
Rps28P62858 Gm12500-202ENSMUST00000186471 2428 ntBASIC9.91□□□□□ -0.82
Rps28P62858 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rps28P62858 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rps28P62858 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Rps28P62858 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC9.9□□□□□ -0.82
Rps28P62858 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Rps28P62858 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rps28P62858 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rps28P62858 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rps28P62858 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Rps28P62858 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rps28P62858 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rps28P62858 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rps28P62858 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Rps28P62858 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
Rps28P62858 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Rps28P62858 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rps28P62858 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rps28P62858 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC9.9□□□□□ -0.82
Rps28P62858 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rps28P62858 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Rps28P62858 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rps28P62858 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rps28P62858 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Rps28P62858 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Rps28P62858 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Rps28P62858 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Rps28P62858 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC9.9□□□□□ -0.83
Rps28P62858 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Rps28P62858 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
Rps28P62858 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Rps28P62858 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Rps28P62858 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
Rps28P62858 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Rps28P62858 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rps28P62858 Gm38273-201ENSMUST00000194987 2382 ntBASIC9.89□□□□□ -0.83
Rps28P62858 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rps28P62858 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms