Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sec61a1P61620 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sec61a1P61620 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sec61a1P61620 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sec61a1P61620 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sec61a1P61620 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sec61a1P61620 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sec61a1P61620 Gm10418-201ENSMUST00000100943 576 ntBASIC14.67□□□□□ -0.06
Sec61a1P61620 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sec61a1P61620 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sec61a1P61620 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sec61a1P61620 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sec61a1P61620 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sec61a1P61620 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sec61a1P61620 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sec61a1P61620 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sec61a1P61620 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sec61a1P61620 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sec61a1P61620 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sec61a1P61620 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sec61a1P61620 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sec61a1P61620 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sec61a1P61620 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sec61a1P61620 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sec61a1P61620 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Sec61a1P61620 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sec61a1P61620 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sec61a1P61620 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sec61a1P61620 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sec61a1P61620 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sec61a1P61620 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Sec61a1P61620 Mir5122-201ENSMUST00000175004 89 ntBASIC14.66□□□□□ -0.06
Sec61a1P61620 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Sec61a1P61620 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.66□□□□□ -0.06
Sec61a1P61620 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sec61a1P61620 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sec61a1P61620 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sec61a1P61620 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sec61a1P61620 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sec61a1P61620 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sec61a1P61620 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sec61a1P61620 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sec61a1P61620 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sec61a1P61620 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sec61a1P61620 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sec61a1P61620 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sec61a1P61620 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.65□□□□□ -0.06
Sec61a1P61620 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Sec61a1P61620 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.65□□□□□ -0.06
Sec61a1P61620 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Sec61a1P61620 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sec61a1P61620 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.65□□□□□ -0.06
Sec61a1P61620 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sec61a1P61620 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Sec61a1P61620 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sec61a1P61620 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.65□□□□□ -0.06
Sec61a1P61620 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sec61a1P61620 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sec61a1P61620 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.65□□□□□ -0.06
Sec61a1P61620 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.65□□□□□ -0.06
Sec61a1P61620 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.65□□□□□ -0.06
Sec61a1P61620 Gm29791-202ENSMUST00000207888 369 ntBASIC14.65□□□□□ -0.06
Sec61a1P61620 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.65□□□□□ -0.06
Sec61a1P61620 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sec61a1P61620 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sec61a1P61620 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sec61a1P61620 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sec61a1P61620 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sec61a1P61620 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Sec61a1P61620 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sec61a1P61620 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sec61a1P61620 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sec61a1P61620 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.06
Sec61a1P61620 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sec61a1P61620 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sec61a1P61620 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sec61a1P61620 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sec61a1P61620 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Sec61a1P61620 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.65□□□□□ -0.06
Sec61a1P61620 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sec61a1P61620 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sec61a1P61620 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Sec61a1P61620 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Sec61a1P61620 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sec61a1P61620 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sec61a1P61620 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sec61a1P61620 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sec61a1P61620 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.64□□□□□ -0.07
Sec61a1P61620 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sec61a1P61620 Gm15565-201ENSMUST00000118890 427 ntBASIC14.64□□□□□ -0.07
Sec61a1P61620 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.64□□□□□ -0.07
Sec61a1P61620 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sec61a1P61620 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sec61a1P61620 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Sec61a1P61620 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sec61a1P61620 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.64□□□□□ -0.07
Sec61a1P61620 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sec61a1P61620 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sec61a1P61620 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sec61a1P61620 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms