Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cks1bP61025 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cks1bP61025 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cks1bP61025 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cks1bP61025 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cks1bP61025 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cks1bP61025 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cks1bP61025 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cks1bP61025 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC11.9□□□□□ -0.51
Cks1bP61025 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1bP61025 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cks1bP61025 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1bP61025 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1bP61025 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1bP61025 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC11.89□□□□□ -0.51
Cks1bP61025 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1bP61025 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1bP61025 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1bP61025 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1bP61025 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1bP61025 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1bP61025 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1bP61025 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1bP61025 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Cks1bP61025 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC11.89□□□□□ -0.51
Cks1bP61025 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC11.89□□□□□ -0.51
Cks1bP61025 Gm21168-201ENSMUST00000199646 1096 ntBASIC11.89□□□□□ -0.51
Cks1bP61025 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC11.89□□□□□ -0.51
Cks1bP61025 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1bP61025 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1bP61025 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1bP61025 Gm37563-201ENSMUST00000192580 1513 ntBASIC11.89□□□□□ -0.51
Cks1bP61025 AC131586.2-201ENSMUST00000228370 1512 ntBASIC11.89□□□□□ -0.51
Cks1bP61025 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1bP61025 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1bP61025 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1bP61025 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1bP61025 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1bP61025 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1bP61025 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1bP61025 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1bP61025 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1bP61025 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1bP61025 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Cks1bP61025 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cks1bP61025 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cks1bP61025 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1bP61025 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cks1bP61025 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1bP61025 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1bP61025 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1bP61025 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1bP61025 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cks1bP61025 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1bP61025 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1bP61025 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cks1bP61025 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1bP61025 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1bP61025 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Cks1bP61025 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1bP61025 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Cks1bP61025 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1bP61025 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1bP61025 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1bP61025 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC11.88□□□□□ -0.51
Cks1bP61025 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1bP61025 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC11.88□□□□□ -0.51
Cks1bP61025 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1bP61025 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1bP61025 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1bP61025 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Cks1bP61025 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC11.88□□□□□ -0.51
Cks1bP61025 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Cks1bP61025 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC11.88□□□□□ -0.51
Cks1bP61025 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC11.88□□□□□ -0.51
Cks1bP61025 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1bP61025 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1bP61025 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1bP61025 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1bP61025 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1bP61025 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1bP61025 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1bP61025 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1bP61025 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1bP61025 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1bP61025 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1bP61025 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1bP61025 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1bP61025 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1bP61025 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cks1bP61025 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Cks1bP61025 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1bP61025 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1bP61025 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Cks1bP61025 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC11.87□□□□□ -0.51
Cks1bP61025 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1bP61025 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1bP61025 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC11.87□□□□□ -0.51
Cks1bP61025 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Cks1bP61025 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms