Protein–RNA interactions for Protein: P59108

Cpne2, Copine-2, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne2P59108 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.1□□□□□ -0.15
Cpne2P59108 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne2P59108 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne2P59108 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cpne2P59108 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne2P59108 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne2P59108 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.09□□□□□ -0.15
Cpne2P59108 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne2P59108 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cpne2P59108 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Cpne2P59108 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.09□□□□□ -0.15
Cpne2P59108 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne2P59108 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne2P59108 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne2P59108 Mir8112-201ENSMUST00000184382 131 ntBASIC14.09□□□□□ -0.15
Cpne2P59108 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC14.09□□□□□ -0.15
Cpne2P59108 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC14.09□□□□□ -0.15
Cpne2P59108 Gm44672-201ENSMUST00000206944 1098 ntBASIC14.09□□□□□ -0.15
Cpne2P59108 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Cpne2P59108 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne2P59108 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne2P59108 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne2P59108 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne2P59108 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne2P59108 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne2P59108 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne2P59108 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne2P59108 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cpne2P59108 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Cpne2P59108 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne2P59108 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne2P59108 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne2P59108 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cpne2P59108 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cpne2P59108 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Cpne2P59108 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Cpne2P59108 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cpne2P59108 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.08□□□□□ -0.15
Cpne2P59108 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.08□□□□□ -0.16
Cpne2P59108 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne2P59108 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.08□□□□□ -0.16
Cpne2P59108 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Cpne2P59108 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne2P59108 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne2P59108 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne2P59108 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne2P59108 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne2P59108 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne2P59108 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne2P59108 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne2P59108 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne2P59108 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne2P59108 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne2P59108 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne2P59108 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cpne2P59108 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne2P59108 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne2P59108 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne2P59108 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne2P59108 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne2P59108 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne2P59108 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne2P59108 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne2P59108 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne2P59108 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC14.07□□□□□ -0.16
Cpne2P59108 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Cpne2P59108 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC14.07□□□□□ -0.16
Cpne2P59108 AC122769.4-201ENSMUST00000228166 901 ntBASIC14.07□□□□□ -0.16
Cpne2P59108 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne2P59108 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne2P59108 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne2P59108 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Cpne2P59108 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne2P59108 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.07□□□□□ -0.16
Cpne2P59108 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Cpne2P59108 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne2P59108 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cpne2P59108 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne2P59108 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne2P59108 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cpne2P59108 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne2P59108 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne2P59108 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne2P59108 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne2P59108 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne2P59108 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne2P59108 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne2P59108 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne2P59108 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne2P59108 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne2P59108 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne2P59108 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne2P59108 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne2P59108 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne2P59108 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne2P59108 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne2P59108 Gm15847-201ENSMUST00000121417 1065 ntBASIC14.06□□□□□ -0.16
Cpne2P59108 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC14.06□□□□□ -0.16
Cpne2P59108 Gm3807-201ENSMUST00000193520 1168 ntBASIC14.06□□□□□ -0.16
Cpne2P59108 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms