Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox1P53783 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.97■□□□□ 0.31
Sox1P53783 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox1P53783 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox1P53783 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox1P53783 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sox1P53783 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.97■□□□□ 0.31
Sox1P53783 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sox1P53783 Gm44430-201ENSMUST00000203376 995 ntBASIC16.97■□□□□ 0.31
Sox1P53783 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sox1P53783 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox1P53783 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox1P53783 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
Sox1P53783 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox1P53783 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox1P53783 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sox1P53783 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sox1P53783 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox1P53783 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.96■□□□□ 0.31
Sox1P53783 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox1P53783 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox1P53783 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox1P53783 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sox1P53783 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.96■□□□□ 0.31
Sox1P53783 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox1P53783 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox1P53783 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Sox1P53783 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Sox1P53783 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox1P53783 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox1P53783 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox1P53783 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Sox1P53783 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Sox1P53783 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Sox1P53783 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox1P53783 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox1P53783 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox1P53783 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox1P53783 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sox1P53783 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox1P53783 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Sox1P53783 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox1P53783 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox1P53783 Gm14127-201ENSMUST00000117906 678 ntBASIC16.95■□□□□ 0.3
Sox1P53783 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC16.95■□□□□ 0.3
Sox1P53783 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sox1P53783 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.95■□□□□ 0.3
Sox1P53783 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Sox1P53783 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox1P53783 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox1P53783 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.95■□□□□ 0.3
Sox1P53783 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox1P53783 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox1P53783 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.95■□□□□ 0.3
Sox1P53783 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox1P53783 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox1P53783 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sox1P53783 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.95■□□□□ 0.3
Sox1P53783 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox1P53783 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sox1P53783 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Sox1P53783 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sox1P53783 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Sox1P53783 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sox1P53783 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox1P53783 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox1P53783 Gm17271-201ENSMUST00000165535 355 ntBASIC16.94■□□□□ 0.3
Sox1P53783 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.94■□□□□ 0.3
Sox1P53783 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.94■□□□□ 0.3
Sox1P53783 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox1P53783 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.94■□□□□ 0.3
Sox1P53783 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.94■□□□□ 0.3
Sox1P53783 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox1P53783 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox1P53783 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Sox1P53783 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Sox1P53783 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sox1P53783 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox1P53783 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.94■□□□□ 0.3
Sox1P53783 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Sox1P53783 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox1P53783 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Sox1P53783 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox1P53783 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox1P53783 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.93■□□□□ 0.3
Sox1P53783 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox1P53783 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox1P53783 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.93■□□□□ 0.3
Sox1P53783 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox1P53783 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox1P53783 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox1P53783 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox1P53783 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.93■□□□□ 0.3
Sox1P53783 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox1P53783 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sox1P53783 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox1P53783 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox1P53783 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox1P53783 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Sox1P53783 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms