Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
SftpbP50405 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SftpbP50405 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SftpbP50405 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SftpbP50405 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SftpbP50405 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SftpbP50405 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SftpbP50405 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SftpbP50405 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SftpbP50405 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SftpbP50405 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.05■□□□□ 0.32
SftpbP50405 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SftpbP50405 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SftpbP50405 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.05■□□□□ 0.32
SftpbP50405 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SftpbP50405 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SftpbP50405 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SftpbP50405 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
SftpbP50405 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.05■□□□□ 0.32
SftpbP50405 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.05■□□□□ 0.32
SftpbP50405 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SftpbP50405 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SftpbP50405 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SftpbP50405 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.05■□□□□ 0.32
SftpbP50405 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SftpbP50405 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SftpbP50405 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SftpbP50405 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SftpbP50405 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SftpbP50405 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SftpbP50405 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SftpbP50405 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SftpbP50405 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SftpbP50405 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SftpbP50405 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SftpbP50405 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SftpbP50405 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SftpbP50405 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SftpbP50405 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SftpbP50405 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SftpbP50405 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SftpbP50405 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.04■□□□□ 0.32
SftpbP50405 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SftpbP50405 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SftpbP50405 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SftpbP50405 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SftpbP50405 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SftpbP50405 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SftpbP50405 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SftpbP50405 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SftpbP50405 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SftpbP50405 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SftpbP50405 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SftpbP50405 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SftpbP50405 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SftpbP50405 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SftpbP50405 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SftpbP50405 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SftpbP50405 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SftpbP50405 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SftpbP50405 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SftpbP50405 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.03■□□□□ 0.32
SftpbP50405 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SftpbP50405 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SftpbP50405 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SftpbP50405 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SftpbP50405 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.03■□□□□ 0.32
SftpbP50405 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.03■□□□□ 0.32
SftpbP50405 Gm9731-201ENSMUST00000209480 747 ntBASIC17.03■□□□□ 0.32
SftpbP50405 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.03■□□□□ 0.32
SftpbP50405 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.03■□□□□ 0.32
SftpbP50405 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SftpbP50405 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SftpbP50405 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SftpbP50405 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SftpbP50405 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
SftpbP50405 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SftpbP50405 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.02■□□□□ 0.32
SftpbP50405 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SftpbP50405 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.02■□□□□ 0.32
SftpbP50405 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SftpbP50405 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SftpbP50405 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.02■□□□□ 0.32
SftpbP50405 Gm27000-201ENSMUST00000182943 842 ntBASIC17.02■□□□□ 0.32
SftpbP50405 Gm29257-201ENSMUST00000186115 639 ntBASIC17.02■□□□□ 0.32
SftpbP50405 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SftpbP50405 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SftpbP50405 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SftpbP50405 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SftpbP50405 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SftpbP50405 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
SftpbP50405 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.02■□□□□ 0.32
SftpbP50405 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SftpbP50405 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
SftpbP50405 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SftpbP50405 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SftpbP50405 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SftpbP50405 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SftpbP50405 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SftpbP50405 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms