Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LtbrP50284 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
LtbrP50284 Gm32996-201ENSMUST00000199828 1447 ntBASIC19.49■□□□□ 0.71
LtbrP50284 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LtbrP50284 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.49■□□□□ 0.71
LtbrP50284 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.48■□□□□ 0.71
LtbrP50284 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.48■□□□□ 0.71
LtbrP50284 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LtbrP50284 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LtbrP50284 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LtbrP50284 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
LtbrP50284 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LtbrP50284 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LtbrP50284 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
LtbrP50284 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC19.48■□□□□ 0.71
LtbrP50284 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LtbrP50284 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LtbrP50284 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
LtbrP50284 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.48■□□□□ 0.71
LtbrP50284 Psmb5-202ENSMUST00000227257 622 ntBASIC19.48■□□□□ 0.71
LtbrP50284 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LtbrP50284 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LtbrP50284 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.48■□□□□ 0.71
LtbrP50284 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
LtbrP50284 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LtbrP50284 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LtbrP50284 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LtbrP50284 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LtbrP50284 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LtbrP50284 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC19.47■□□□□ 0.71
LtbrP50284 Gm13830-205ENSMUST00000201195 1155 ntBASIC19.47■□□□□ 0.71
LtbrP50284 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC19.47■□□□□ 0.71
LtbrP50284 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LtbrP50284 Gm15823-201ENSMUST00000064305 670 ntBASIC19.47■□□□□ 0.71
LtbrP50284 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LtbrP50284 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LtbrP50284 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LtbrP50284 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LtbrP50284 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LtbrP50284 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LtbrP50284 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LtbrP50284 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LtbrP50284 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LtbrP50284 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LtbrP50284 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LtbrP50284 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LtbrP50284 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
LtbrP50284 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LtbrP50284 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LtbrP50284 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LtbrP50284 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LtbrP50284 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC19.46■□□□□ 0.71
LtbrP50284 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LtbrP50284 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LtbrP50284 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.46■□□□□ 0.71
LtbrP50284 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LtbrP50284 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LtbrP50284 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LtbrP50284 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LtbrP50284 AC154527.4-201ENSMUST00000224364 1667 ntBASIC19.46■□□□□ 0.71
LtbrP50284 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
LtbrP50284 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LtbrP50284 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
LtbrP50284 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
LtbrP50284 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LtbrP50284 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LtbrP50284 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LtbrP50284 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
LtbrP50284 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC19.45■□□□□ 0.7
LtbrP50284 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LtbrP50284 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC19.45■□□□□ 0.7
LtbrP50284 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LtbrP50284 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC19.45■□□□□ 0.7
LtbrP50284 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LtbrP50284 Gm27867-201ENSMUST00000184778 125 ntBASIC19.45■□□□□ 0.7
LtbrP50284 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LtbrP50284 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LtbrP50284 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LtbrP50284 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LtbrP50284 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
LtbrP50284 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LtbrP50284 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LtbrP50284 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LtbrP50284 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LtbrP50284 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
LtbrP50284 Gm4995-201ENSMUST00000117247 432 ntBASIC19.44■□□□□ 0.7
LtbrP50284 Rprl3-201ENSMUST00000157400 290 ntBASIC19.44■□□□□ 0.7
LtbrP50284 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
LtbrP50284 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC19.44■□□□□ 0.7
LtbrP50284 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
LtbrP50284 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LtbrP50284 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LtbrP50284 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LtbrP50284 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.44■□□□□ 0.7
LtbrP50284 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC19.44■□□□□ 0.7
LtbrP50284 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LtbrP50284 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LtbrP50284 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LtbrP50284 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
LtbrP50284 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms