Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-1P50220 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Nkx2-1P50220 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-1P50220 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Nkx2-1P50220 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Nkx2-1P50220 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC13.83□□□□□ -0.2
Nkx2-1P50220 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC13.83□□□□□ -0.2
Nkx2-1P50220 Rab3c-203ENSMUST00000224180 967 ntBASIC13.83□□□□□ -0.2
Nkx2-1P50220 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-1P50220 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-1P50220 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-1P50220 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Nkx2-1P50220 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.83□□□□□ -0.2
Nkx2-1P50220 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Nkx2-1P50220 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-1P50220 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-1P50220 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-1P50220 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Nkx2-1P50220 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-1P50220 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Nkx2-1P50220 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-1P50220 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-1P50220 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Nkx2-1P50220 Gm26524-201ENSMUST00000192339 390 ntBASIC13.82□□□□□ -0.2
Nkx2-1P50220 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC13.82□□□□□ -0.2
Nkx2-1P50220 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC13.82□□□□□ -0.2
Nkx2-1P50220 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-1P50220 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-1P50220 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-1P50220 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-1P50220 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-1P50220 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.82□□□□□ -0.2
Nkx2-1P50220 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Nkx2-1P50220 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Nkx2-1P50220 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-1P50220 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-1P50220 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-1P50220 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.82□□□□□ -0.2
Nkx2-1P50220 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-1P50220 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Nkx2-1P50220 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-1P50220 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-1P50220 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-1P50220 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-1P50220 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-1P50220 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC13.81□□□□□ -0.2
Nkx2-1P50220 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-1P50220 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-1P50220 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-1P50220 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-1P50220 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-1P50220 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Nkx2-1P50220 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-1P50220 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-1P50220 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC13.81□□□□□ -0.2
Nkx2-1P50220 AC164629.5-201ENSMUST00000220387 632 ntBASIC13.81□□□□□ -0.2
Nkx2-1P50220 AC107711.5-202ENSMUST00000226429 702 ntBASIC13.81□□□□□ -0.2
Nkx2-1P50220 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-1P50220 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Nkx2-1P50220 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Nkx2-1P50220 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-1P50220 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-1P50220 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-1P50220 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-1P50220 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Nkx2-1P50220 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC13.81□□□□□ -0.2
Nkx2-1P50220 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC13.81□□□□□ -0.2
Nkx2-1P50220 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-1P50220 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-1P50220 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-1P50220 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-1P50220 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-1P50220 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-1P50220 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-1P50220 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.8□□□□□ -0.2
Nkx2-1P50220 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-1P50220 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-1P50220 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-1P50220 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-1P50220 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Nkx2-1P50220 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC13.8□□□□□ -0.2
Nkx2-1P50220 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Nkx2-1P50220 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-1P50220 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Nkx2-1P50220 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Nkx2-1P50220 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Nkx2-1P50220 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Nkx2-1P50220 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Nkx2-1P50220 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-1P50220 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-1P50220 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-1P50220 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Nkx2-1P50220 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-1P50220 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-1P50220 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-1P50220 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-1P50220 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-1P50220 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-1P50220 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-1P50220 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms