Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hnf4aP49698 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hnf4aP49698 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hnf4aP49698 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Hnf4aP49698 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.12■□□□□ 0.17
Hnf4aP49698 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hnf4aP49698 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hnf4aP49698 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hnf4aP49698 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Hnf4aP49698 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.12■□□□□ 0.17
Hnf4aP49698 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hnf4aP49698 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hnf4aP49698 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Hnf4aP49698 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hnf4aP49698 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hnf4aP49698 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hnf4aP49698 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hnf4aP49698 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hnf4aP49698 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hnf4aP49698 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Hnf4aP49698 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Hnf4aP49698 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hnf4aP49698 Gm37055-201ENSMUST00000191866 133 ntBASIC16.11■□□□□ 0.17
Hnf4aP49698 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Hnf4aP49698 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hnf4aP49698 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hnf4aP49698 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hnf4aP49698 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hnf4aP49698 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
Hnf4aP49698 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hnf4aP49698 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hnf4aP49698 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Hnf4aP49698 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Hnf4aP49698 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hnf4aP49698 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hnf4aP49698 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Hnf4aP49698 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hnf4aP49698 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hnf4aP49698 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hnf4aP49698 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hnf4aP49698 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hnf4aP49698 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Hnf4aP49698 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.1■□□□□ 0.17
Hnf4aP49698 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Hnf4aP49698 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.1■□□□□ 0.17
Hnf4aP49698 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.1■□□□□ 0.17
Hnf4aP49698 Gm30025-201ENSMUST00000218555 728 ntBASIC16.1■□□□□ 0.17
Hnf4aP49698 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hnf4aP49698 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Hnf4aP49698 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hnf4aP49698 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Hnf4aP49698 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Hnf4aP49698 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hnf4aP49698 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.09■□□□□ 0.17
Hnf4aP49698 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.09■□□□□ 0.17
Hnf4aP49698 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hnf4aP49698 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hnf4aP49698 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Hnf4aP49698 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.09■□□□□ 0.17
Hnf4aP49698 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.09■□□□□ 0.17
Hnf4aP49698 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hnf4aP49698 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.09■□□□□ 0.17
Hnf4aP49698 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hnf4aP49698 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Hnf4aP49698 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hnf4aP49698 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hnf4aP49698 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Hnf4aP49698 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Hnf4aP49698 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Hnf4aP49698 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Hnf4aP49698 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Hnf4aP49698 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hnf4aP49698 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.08■□□□□ 0.16
Hnf4aP49698 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.08■□□□□ 0.16
Hnf4aP49698 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Hnf4aP49698 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hnf4aP49698 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.08■□□□□ 0.16
Hnf4aP49698 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
Hnf4aP49698 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Hnf4aP49698 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Hnf4aP49698 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Hnf4aP49698 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hnf4aP49698 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Hnf4aP49698 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Hnf4aP49698 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hnf4aP49698 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Hnf4aP49698 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hnf4aP49698 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hnf4aP49698 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Hnf4aP49698 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hnf4aP49698 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Hnf4aP49698 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hnf4aP49698 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Hnf4aP49698 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
Hnf4aP49698 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.07■□□□□ 0.16
Hnf4aP49698 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.07■□□□□ 0.16
Hnf4aP49698 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hnf4aP49698 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hnf4aP49698 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hnf4aP49698 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms