Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.63■□□□□ 0.57
Brca1P48754 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Brca1P48754 Gm27321-201ENSMUST00000185021 205 ntBASIC18.63■□□□□ 0.57
Brca1P48754 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC18.63■□□□□ 0.57
Brca1P48754 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.63■□□□□ 0.57
Brca1P48754 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Brca1P48754 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.63■□□□□ 0.57
Brca1P48754 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Brca1P48754 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.63■□□□□ 0.57
Brca1P48754 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Brca1P48754 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Brca1P48754 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.63■□□□□ 0.57
Brca1P48754 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
Brca1P48754 Gm5186-201ENSMUST00000218781 920 ntBASIC18.63■□□□□ 0.57
Brca1P48754 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Brca1P48754 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Brca1P48754 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Brca1P48754 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Brca1P48754 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Brca1P48754 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Brca1P48754 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Brca1P48754 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Brca1P48754 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Brca1P48754 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Brca1P48754 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Brca1P48754 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC18.62■□□□□ 0.57
Brca1P48754 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Brca1P48754 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC18.62■□□□□ 0.57
Brca1P48754 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC18.62■□□□□ 0.57
Brca1P48754 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Brca1P48754 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Brca1P48754 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.62■□□□□ 0.57
Brca1P48754 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Brca1P48754 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Brca1P48754 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Brca1P48754 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Brca1P48754 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.61■□□□□ 0.57
Brca1P48754 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.61■□□□□ 0.57
Brca1P48754 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Brca1P48754 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Brca1P48754 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Brca1P48754 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Brca1P48754 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Brca1P48754 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Brca1P48754 H2af-ps-201ENSMUST00000119066 295 ntBASIC18.61■□□□□ 0.57
Brca1P48754 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.61■□□□□ 0.57
Brca1P48754 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.61■□□□□ 0.57
Brca1P48754 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Brca1P48754 Mir8117-201ENSMUST00000184773 107 ntBASIC18.61■□□□□ 0.57
Brca1P48754 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.61■□□□□ 0.57
Brca1P48754 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Brca1P48754 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.61■□□□□ 0.57
Brca1P48754 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Brca1P48754 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Brca1P48754 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Brca1P48754 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Brca1P48754 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Brca1P48754 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC18.6■□□□□ 0.57
Brca1P48754 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Brca1P48754 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Brca1P48754 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Brca1P48754 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Brca1P48754 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.6■□□□□ 0.57
Brca1P48754 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Brca1P48754 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.6■□□□□ 0.57
Brca1P48754 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.6■□□□□ 0.57
Brca1P48754 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.6■□□□□ 0.57
Brca1P48754 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Brca1P48754 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC18.6■□□□□ 0.57
Brca1P48754 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Brca1P48754 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Brca1P48754 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Brca1P48754 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Brca1P48754 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Brca1P48754 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Brca1P48754 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Brca1P48754 Gm13127-201ENSMUST00000118978 1389 ntBASIC18.59■□□□□ 0.57
Brca1P48754 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Brca1P48754 Gm5682-201ENSMUST00000173402 505 ntBASIC18.59■□□□□ 0.57
Brca1P48754 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC18.59■□□□□ 0.57
Brca1P48754 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Brca1P48754 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Brca1P48754 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Brca1P48754 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Brca1P48754 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.59■□□□□ 0.57
Brca1P48754 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Brca1P48754 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.58■□□□□ 0.57
Brca1P48754 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Brca1P48754 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Brca1P48754 Gm7222-201ENSMUST00000117512 906 ntBASIC18.58■□□□□ 0.57
Brca1P48754 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Brca1P48754 Mir6404-201ENSMUST00000183699 94 ntBASIC18.58■□□□□ 0.57
Brca1P48754 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Brca1P48754 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Brca1P48754 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Brca1P48754 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Brca1P48754 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Brca1P48754 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Brca1P48754 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Brca1P48754 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms