Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Xcl1P47993 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Xcl1P47993 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Xcl1P47993 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Xcl1P47993 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Xcl1P47993 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Xcl1P47993 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Xcl1P47993 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC10.9□□□□□ -0.66
Xcl1P47993 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Xcl1P47993 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Xcl1P47993 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Xcl1P47993 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Xcl1P47993 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Xcl1P47993 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Xcl1P47993 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Xcl1P47993 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Xcl1P47993 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC10.9□□□□□ -0.66
Xcl1P47993 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC10.9□□□□□ -0.66
Xcl1P47993 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Xcl1P47993 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Xcl1P47993 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Xcl1P47993 Gm8309-201ENSMUST00000206627 1448 ntBASIC10.9□□□□□ -0.66
Xcl1P47993 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Xcl1P47993 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Xcl1P47993 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
Xcl1P47993 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Xcl1P47993 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC10.9□□□□□ -0.67
Xcl1P47993 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Xcl1P47993 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Xcl1P47993 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Xcl1P47993 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Xcl1P47993 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Xcl1P47993 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Xcl1P47993 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Xcl1P47993 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Xcl1P47993 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Xcl1P47993 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Xcl1P47993 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Xcl1P47993 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Xcl1P47993 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Xcl1P47993 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Xcl1P47993 Gm7332-201ENSMUST00000118351 454 ntBASIC10.89□□□□□ -0.67
Xcl1P47993 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Xcl1P47993 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC10.89□□□□□ -0.67
Xcl1P47993 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC10.89□□□□□ -0.67
Xcl1P47993 Gm19094-201ENSMUST00000209791 1246 ntBASIC10.89□□□□□ -0.67
Xcl1P47993 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Xcl1P47993 Ntrk2-205ENSMUST00000224402 2284 ntBASIC10.89□□□□□ -0.67
Xcl1P47993 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Xcl1P47993 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Xcl1P47993 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Xcl1P47993 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Xcl1P47993 AC154412.1-201ENSMUST00000226540 2786 ntBASIC10.88□□□□□ -0.67
Xcl1P47993 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Xcl1P47993 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Xcl1P47993 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Xcl1P47993 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Xcl1P47993 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Xcl1P47993 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
Xcl1P47993 AC125311.2-201ENSMUST00000227477 1940 ntBASIC10.88□□□□□ -0.67
Xcl1P47993 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Xcl1P47993 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC10.88□□□□□ -0.67
Xcl1P47993 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Xcl1P47993 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Xcl1P47993 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC10.88□□□□□ -0.67
Xcl1P47993 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Xcl1P47993 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Xcl1P47993 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Xcl1P47993 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Xcl1P47993 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC10.88□□□□□ -0.67
Xcl1P47993 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Xcl1P47993 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Xcl1P47993 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Xcl1P47993 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Xcl1P47993 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Xcl1P47993 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Xcl1P47993 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC10.88□□□□□ -0.67
Xcl1P47993 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Xcl1P47993 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Xcl1P47993 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Xcl1P47993 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Xcl1P47993 Gm37912-201ENSMUST00000191895 3076 ntBASIC10.88□□□□□ -0.67
Xcl1P47993 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Xcl1P47993 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Xcl1P47993 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Xcl1P47993 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Xcl1P47993 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Xcl1P47993 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Xcl1P47993 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Xcl1P47993 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Xcl1P47993 Prob1-201ENSMUST00000097619 3021 ntBASIC10.87□□□□□ -0.67
Xcl1P47993 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Xcl1P47993 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Xcl1P47993 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Xcl1P47993 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Xcl1P47993 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Xcl1P47993 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC10.87□□□□□ -0.67
Xcl1P47993 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Xcl1P47993 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Xcl1P47993 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms