Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps4bP46467 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.87■□□□□ 0.29
Vps4bP46467 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.87■□□□□ 0.29
Vps4bP46467 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps4bP46467 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps4bP46467 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps4bP46467 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vps4bP46467 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vps4bP46467 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vps4bP46467 Odf3b-204ENSMUST00000227834 930 ntBASIC16.87■□□□□ 0.29
Vps4bP46467 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps4bP46467 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vps4bP46467 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps4bP46467 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps4bP46467 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps4bP46467 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps4bP46467 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.87■□□□□ 0.29
Vps4bP46467 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps4bP46467 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps4bP46467 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps4bP46467 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.86■□□□□ 0.29
Vps4bP46467 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps4bP46467 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps4bP46467 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps4bP46467 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps4bP46467 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps4bP46467 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps4bP46467 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Vps4bP46467 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Vps4bP46467 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.86■□□□□ 0.29
Vps4bP46467 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps4bP46467 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.86■□□□□ 0.29
Vps4bP46467 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Vps4bP46467 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Vps4bP46467 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Vps4bP46467 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Vps4bP46467 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps4bP46467 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.86■□□□□ 0.29
Vps4bP46467 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Vps4bP46467 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Vps4bP46467 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps4bP46467 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps4bP46467 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
Vps4bP46467 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Vps4bP46467 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps4bP46467 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps4bP46467 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps4bP46467 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps4bP46467 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vps4bP46467 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps4bP46467 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vps4bP46467 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps4bP46467 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps4bP46467 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps4bP46467 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.85■□□□□ 0.29
Vps4bP46467 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps4bP46467 Gm15565-201ENSMUST00000118890 427 ntBASIC16.85■□□□□ 0.29
Vps4bP46467 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vps4bP46467 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vps4bP46467 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Vps4bP46467 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vps4bP46467 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps4bP46467 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps4bP46467 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.85■□□□□ 0.29
Vps4bP46467 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps4bP46467 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vps4bP46467 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
Vps4bP46467 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vps4bP46467 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps4bP46467 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.85■□□□□ 0.29
Vps4bP46467 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps4bP46467 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vps4bP46467 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps4bP46467 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps4bP46467 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.85■□□□□ 0.29
Vps4bP46467 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps4bP46467 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Vps4bP46467 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps4bP46467 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.84■□□□□ 0.29
Vps4bP46467 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps4bP46467 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps4bP46467 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps4bP46467 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps4bP46467 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vps4bP46467 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps4bP46467 Gm7791-201ENSMUST00000219066 539 ntBASIC16.84■□□□□ 0.29
Vps4bP46467 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps4bP46467 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps4bP46467 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps4bP46467 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps4bP46467 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vps4bP46467 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.84■□□□□ 0.29
Vps4bP46467 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vps4bP46467 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps4bP46467 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Vps4bP46467 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Vps4bP46467 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps4bP46467 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps4bP46467 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps4bP46467 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms