Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sdc2P43407 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sdc2P43407 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sdc2P43407 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sdc2P43407 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sdc2P43407 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sdc2P43407 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sdc2P43407 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sdc2P43407 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
Sdc2P43407 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sdc2P43407 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sdc2P43407 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sdc2P43407 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.67■□□□□ 0.58
Sdc2P43407 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sdc2P43407 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sdc2P43407 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sdc2P43407 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Sdc2P43407 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sdc2P43407 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sdc2P43407 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sdc2P43407 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.67■□□□□ 0.58
Sdc2P43407 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sdc2P43407 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sdc2P43407 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Sdc2P43407 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sdc2P43407 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sdc2P43407 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sdc2P43407 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sdc2P43407 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.66■□□□□ 0.58
Sdc2P43407 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sdc2P43407 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sdc2P43407 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sdc2P43407 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sdc2P43407 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.66■□□□□ 0.58
Sdc2P43407 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.66■□□□□ 0.58
Sdc2P43407 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.66■□□□□ 0.58
Sdc2P43407 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.66■□□□□ 0.58
Sdc2P43407 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sdc2P43407 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.66■□□□□ 0.58
Sdc2P43407 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.66■□□□□ 0.58
Sdc2P43407 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.66■□□□□ 0.58
Sdc2P43407 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sdc2P43407 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sdc2P43407 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sdc2P43407 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.66■□□□□ 0.58
Sdc2P43407 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sdc2P43407 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sdc2P43407 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sdc2P43407 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sdc2P43407 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sdc2P43407 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sdc2P43407 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sdc2P43407 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sdc2P43407 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Sdc2P43407 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sdc2P43407 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Sdc2P43407 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Sdc2P43407 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sdc2P43407 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sdc2P43407 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sdc2P43407 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sdc2P43407 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sdc2P43407 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sdc2P43407 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sdc2P43407 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sdc2P43407 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sdc2P43407 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sdc2P43407 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Sdc2P43407 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Sdc2P43407 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sdc2P43407 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sdc2P43407 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sdc2P43407 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sdc2P43407 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sdc2P43407 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sdc2P43407 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sdc2P43407 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sdc2P43407 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Sdc2P43407 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sdc2P43407 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.64■□□□□ 0.57
Sdc2P43407 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sdc2P43407 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sdc2P43407 Gm715-201ENSMUST00000117865 831 ntBASIC18.64■□□□□ 0.57
Sdc2P43407 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.64■□□□□ 0.57
Sdc2P43407 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.64■□□□□ 0.57
Sdc2P43407 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Sdc2P43407 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Sdc2P43407 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Sdc2P43407 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sdc2P43407 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sdc2P43407 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Sdc2P43407 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.64■□□□□ 0.57
Sdc2P43407 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sdc2P43407 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sdc2P43407 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sdc2P43407 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sdc2P43407 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sdc2P43407 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sdc2P43407 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc2P43407 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms