Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Msh2P43247 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Msh2P43247 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Msh2P43247 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Msh2P43247 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Msh2P43247 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.14■□□□□ 0.33
Msh2P43247 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.14■□□□□ 0.33
Msh2P43247 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.14■□□□□ 0.33
Msh2P43247 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.14■□□□□ 0.33
Msh2P43247 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Msh2P43247 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Msh2P43247 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Msh2P43247 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.14■□□□□ 0.33
Msh2P43247 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Msh2P43247 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.14■□□□□ 0.33
Msh2P43247 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Msh2P43247 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Msh2P43247 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Msh2P43247 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Msh2P43247 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Msh2P43247 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Msh2P43247 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Msh2P43247 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Msh2P43247 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Msh2P43247 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Msh2P43247 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Msh2P43247 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Msh2P43247 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Msh2P43247 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Msh2P43247 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.13■□□□□ 0.33
Msh2P43247 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Msh2P43247 Timm23-208ENSMUST00000226683 750 ntBASIC17.13■□□□□ 0.33
Msh2P43247 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.13■□□□□ 0.33
Msh2P43247 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Msh2P43247 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Msh2P43247 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Msh2P43247 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Msh2P43247 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Msh2P43247 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Msh2P43247 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Msh2P43247 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Msh2P43247 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
Msh2P43247 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Msh2P43247 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
Msh2P43247 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Msh2P43247 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.13■□□□□ 0.33
Msh2P43247 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msh2P43247 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msh2P43247 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msh2P43247 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msh2P43247 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Msh2P43247 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Msh2P43247 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.12■□□□□ 0.33
Msh2P43247 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Msh2P43247 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Msh2P43247 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Msh2P43247 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Msh2P43247 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msh2P43247 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msh2P43247 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msh2P43247 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Msh2P43247 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Msh2P43247 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msh2P43247 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msh2P43247 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msh2P43247 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msh2P43247 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msh2P43247 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msh2P43247 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msh2P43247 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Msh2P43247 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Msh2P43247 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Msh2P43247 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Msh2P43247 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Msh2P43247 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Msh2P43247 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Msh2P43247 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.11■□□□□ 0.33
Msh2P43247 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Msh2P43247 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Msh2P43247 Gm12085-201ENSMUST00000119263 940 ntBASIC17.11■□□□□ 0.33
Msh2P43247 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Msh2P43247 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Msh2P43247 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Msh2P43247 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Msh2P43247 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Msh2P43247 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Msh2P43247 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Msh2P43247 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Msh2P43247 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Msh2P43247 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msh2P43247 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.1■□□□□ 0.33
Msh2P43247 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msh2P43247 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msh2P43247 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Msh2P43247 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.1■□□□□ 0.33
Msh2P43247 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Msh2P43247 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.1■□□□□ 0.33
Msh2P43247 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.1■□□□□ 0.33
Msh2P43247 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.1■□□□□ 0.33
Msh2P43247 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms