Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cxcl12P40224 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cxcl12P40224 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cxcl12P40224 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cxcl12P40224 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cxcl12P40224 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cxcl12P40224 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cxcl12P40224 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cxcl12P40224 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cxcl12P40224 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cxcl12P40224 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cxcl12P40224 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cxcl12P40224 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cxcl12P40224 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cxcl12P40224 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cxcl12P40224 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Cxcl12P40224 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cxcl12P40224 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cxcl12P40224 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cxcl12P40224 Gm5186-201ENSMUST00000218781 920 ntBASIC17.13■□□□□ 0.33
Cxcl12P40224 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cxcl12P40224 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cxcl12P40224 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cxcl12P40224 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cxcl12P40224 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cxcl12P40224 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cxcl12P40224 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cxcl12P40224 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cxcl12P40224 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cxcl12P40224 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cxcl12P40224 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cxcl12P40224 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.12■□□□□ 0.33
Cxcl12P40224 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cxcl12P40224 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cxcl12P40224 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Cxcl12P40224 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Cxcl12P40224 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cxcl12P40224 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cxcl12P40224 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cxcl12P40224 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.12■□□□□ 0.33
Cxcl12P40224 Gm4459-201ENSMUST00000118750 468 ntBASIC17.12■□□□□ 0.33
Cxcl12P40224 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cxcl12P40224 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.12■□□□□ 0.33
Cxcl12P40224 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC17.12■□□□□ 0.33
Cxcl12P40224 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cxcl12P40224 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cxcl12P40224 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cxcl12P40224 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cxcl12P40224 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cxcl12P40224 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cxcl12P40224 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.11■□□□□ 0.33
Cxcl12P40224 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cxcl12P40224 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cxcl12P40224 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cxcl12P40224 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Cxcl12P40224 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cxcl12P40224 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cxcl12P40224 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.11■□□□□ 0.33
Cxcl12P40224 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cxcl12P40224 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.11■□□□□ 0.33
Cxcl12P40224 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.11■□□□□ 0.33
Cxcl12P40224 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.11■□□□□ 0.33
Cxcl12P40224 Mir8117-201ENSMUST00000184773 107 ntBASIC17.11■□□□□ 0.33
Cxcl12P40224 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.11■□□□□ 0.33
Cxcl12P40224 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cxcl12P40224 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cxcl12P40224 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cxcl12P40224 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cxcl12P40224 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cxcl12P40224 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.11■□□□□ 0.33
Cxcl12P40224 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cxcl12P40224 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cxcl12P40224 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cxcl12P40224 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cxcl12P40224 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.11■□□□□ 0.33
Cxcl12P40224 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Cxcl12P40224 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cxcl12P40224 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cxcl12P40224 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cxcl12P40224 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cxcl12P40224 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cxcl12P40224 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cxcl12P40224 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cxcl12P40224 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Cxcl12P40224 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cxcl12P40224 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Cxcl12P40224 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cxcl12P40224 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cxcl12P40224 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cxcl12P40224 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.1■□□□□ 0.33
Cxcl12P40224 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cxcl12P40224 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cxcl12P40224 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.1■□□□□ 0.33
Cxcl12P40224 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cxcl12P40224 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.1■□□□□ 0.33
Cxcl12P40224 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.1■□□□□ 0.33
Cxcl12P40224 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.1■□□□□ 0.33
Cxcl12P40224 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.1■□□□□ 0.33
Cxcl12P40224 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cxcl12P40224 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms