Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fen1P39749 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fen1P39749 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fen1P39749 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fen1P39749 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Fen1P39749 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fen1P39749 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fen1P39749 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Fen1P39749 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Fen1P39749 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fen1P39749 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.78■□□□□ 0.28
Fen1P39749 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fen1P39749 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Fen1P39749 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fen1P39749 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fen1P39749 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fen1P39749 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Fen1P39749 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.78■□□□□ 0.28
Fen1P39749 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Fen1P39749 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Fen1P39749 Gm10138-203ENSMUST00000206952 366 ntBASIC16.78■□□□□ 0.28
Fen1P39749 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.78■□□□□ 0.28
Fen1P39749 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Fen1P39749 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fen1P39749 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fen1P39749 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Fen1P39749 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fen1P39749 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Fen1P39749 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fen1P39749 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.78■□□□□ 0.28
Fen1P39749 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fen1P39749 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fen1P39749 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fen1P39749 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fen1P39749 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fen1P39749 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Fen1P39749 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Fen1P39749 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Fen1P39749 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Fen1P39749 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Fen1P39749 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Fen1P39749 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Fen1P39749 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Fen1P39749 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.77■□□□□ 0.28
Fen1P39749 Gm15375-201ENSMUST00000119510 849 ntBASIC16.77■□□□□ 0.28
Fen1P39749 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.77■□□□□ 0.28
Fen1P39749 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Fen1P39749 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.77■□□□□ 0.28
Fen1P39749 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Fen1P39749 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Fen1P39749 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.77■□□□□ 0.28
Fen1P39749 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Fen1P39749 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Fen1P39749 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.77■□□□□ 0.27
Fen1P39749 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Fen1P39749 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.77■□□□□ 0.27
Fen1P39749 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Fen1P39749 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Fen1P39749 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Fen1P39749 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Fen1P39749 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Fen1P39749 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Fen1P39749 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Fen1P39749 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.76■□□□□ 0.27
Fen1P39749 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.76■□□□□ 0.27
Fen1P39749 Gm10653-202ENSMUST00000139570 835 ntBASIC16.76■□□□□ 0.27
Fen1P39749 Gm2559-201ENSMUST00000201323 363 ntBASIC16.76■□□□□ 0.27
Fen1P39749 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Fen1P39749 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Fen1P39749 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Fen1P39749 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Fen1P39749 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Fen1P39749 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Fen1P39749 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.75■□□□□ 0.27
Fen1P39749 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Fen1P39749 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Fen1P39749 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Fen1P39749 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Fen1P39749 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Fen1P39749 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Fen1P39749 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Fen1P39749 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.75■□□□□ 0.27
Fen1P39749 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Fen1P39749 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Fen1P39749 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Fen1P39749 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Fen1P39749 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Fen1P39749 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.75■□□□□ 0.27
Fen1P39749 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Fen1P39749 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Fen1P39749 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Fen1P39749 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Fen1P39749 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Fen1P39749 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Fen1P39749 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Fen1P39749 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Fen1P39749 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Fen1P39749 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Fen1P39749 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Fen1P39749 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms