Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp13P33435 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp13P33435 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp13P33435 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp13P33435 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp13P33435 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp13P33435 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp13P33435 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp13P33435 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp13P33435 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.05■□□□□ 0.32
Mmp13P33435 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp13P33435 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp13P33435 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.05■□□□□ 0.32
Mmp13P33435 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp13P33435 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp13P33435 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp13P33435 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp13P33435 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp13P33435 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp13P33435 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp13P33435 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.04■□□□□ 0.32
Mmp13P33435 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp13P33435 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp13P33435 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.04■□□□□ 0.32
Mmp13P33435 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.04■□□□□ 0.32
Mmp13P33435 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.04■□□□□ 0.32
Mmp13P33435 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.04■□□□□ 0.32
Mmp13P33435 Gm30025-201ENSMUST00000218555 728 ntBASIC17.04■□□□□ 0.32
Mmp13P33435 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp13P33435 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp13P33435 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Mmp13P33435 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp13P33435 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp13P33435 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp13P33435 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.04■□□□□ 0.32
Mmp13P33435 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Mmp13P33435 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Mmp13P33435 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp13P33435 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp13P33435 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp13P33435 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp13P33435 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Mmp13P33435 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Mmp13P33435 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.03■□□□□ 0.32
Mmp13P33435 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.03■□□□□ 0.32
Mmp13P33435 Gm24841-201ENSMUST00000158676 357 ntBASIC17.03■□□□□ 0.32
Mmp13P33435 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.03■□□□□ 0.32
Mmp13P33435 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp13P33435 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp13P33435 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp13P33435 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp13P33435 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Mmp13P33435 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp13P33435 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Mmp13P33435 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp13P33435 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp13P33435 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp13P33435 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Mmp13P33435 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp13P33435 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp13P33435 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Mmp13P33435 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp13P33435 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.02■□□□□ 0.32
Mmp13P33435 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.02■□□□□ 0.32
Mmp13P33435 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.02■□□□□ 0.32
Mmp13P33435 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp13P33435 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp13P33435 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Mmp13P33435 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp13P33435 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp13P33435 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp13P33435 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp13P33435 Gm3375-201ENSMUST00000203929 796 ntBASIC17.02■□□□□ 0.32
Mmp13P33435 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.02■□□□□ 0.32
Mmp13P33435 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Mmp13P33435 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp13P33435 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp13P33435 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp13P33435 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Mmp13P33435 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mmp13P33435 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mmp13P33435 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Mmp13P33435 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.02■□□□□ 0.31
Mmp13P33435 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Mmp13P33435 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mmp13P33435 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mmp13P33435 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Mmp13P33435 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp13P33435 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp13P33435 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp13P33435 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp13P33435 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.01■□□□□ 0.31
Mmp13P33435 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp13P33435 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp13P33435 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp13P33435 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp13P33435 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp13P33435 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp13P33435 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.01■□□□□ 0.31
Mmp13P33435 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms