Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp13P33435 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp13P33435 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp13P33435 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp13P33435 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp13P33435 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp13P33435 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp13P33435 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp13P33435 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp13P33435 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.05■□□□□ 0.32
Mmp13P33435 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp13P33435 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp13P33435 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.05■□□□□ 0.32
Mmp13P33435 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp13P33435 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp13P33435 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp13P33435 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp13P33435 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp13P33435 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp13P33435 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp13P33435 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.04■□□□□ 0.32
Mmp13P33435 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp13P33435 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp13P33435 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.04■□□□□ 0.32
Mmp13P33435 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.04■□□□□ 0.32
Mmp13P33435 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.04■□□□□ 0.32
Mmp13P33435 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.04■□□□□ 0.32
Mmp13P33435 Gm30025-201ENSMUST00000218555 728 ntBASIC17.04■□□□□ 0.32
Mmp13P33435 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp13P33435 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp13P33435 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Mmp13P33435 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp13P33435 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp13P33435 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp13P33435 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.04■□□□□ 0.32
Mmp13P33435 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Mmp13P33435 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Mmp13P33435 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp13P33435 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp13P33435 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp13P33435 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp13P33435 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Mmp13P33435 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Mmp13P33435 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.03■□□□□ 0.32
Mmp13P33435 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.03■□□□□ 0.32
Mmp13P33435 Gm24841-201ENSMUST00000158676 357 ntBASIC17.03■□□□□ 0.32
Mmp13P33435 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.03■□□□□ 0.32
Mmp13P33435 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp13P33435 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp13P33435 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp13P33435 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp13P33435 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Mmp13P33435 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp13P33435 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Mmp13P33435 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp13P33435 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp13P33435 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp13P33435 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Mmp13P33435 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp13P33435 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp13P33435 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Mmp13P33435 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp13P33435 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.02■□□□□ 0.32
Mmp13P33435 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.02■□□□□ 0.32
Mmp13P33435 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.02■□□□□ 0.32
Mmp13P33435 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp13P33435 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp13P33435 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Mmp13P33435 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp13P33435 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp13P33435 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp13P33435 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp13P33435 Gm3375-201ENSMUST00000203929 796 ntBASIC17.02■□□□□ 0.32
Mmp13P33435 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.02■□□□□ 0.32
Mmp13P33435 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Mmp13P33435 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp13P33435 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp13P33435 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp13P33435 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Mmp13P33435 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mmp13P33435 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mmp13P33435 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Mmp13P33435 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.02■□□□□ 0.31
Mmp13P33435 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Mmp13P33435 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mmp13P33435 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mmp13P33435 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Mmp13P33435 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp13P33435 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp13P33435 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp13P33435 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp13P33435 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.01■□□□□ 0.31
Mmp13P33435 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp13P33435 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp13P33435 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp13P33435 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp13P33435 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp13P33435 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp13P33435 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.01■□□□□ 0.31
Mmp13P33435 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms