Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Gm6211-202ENSMUST00000167849 925 ntBASIC13.21□□□□□ -0.29
Rom1P32958 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Rom1P32958 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rom1P32958 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rom1P32958 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rom1P32958 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.21□□□□□ -0.29
Rom1P32958 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rom1P32958 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rom1P32958 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC13.21□□□□□ -0.3
Rom1P32958 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rom1P32958 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rom1P32958 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.21□□□□□ -0.3
Rom1P32958 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rom1P32958 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rom1P32958 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Rom1P32958 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rom1P32958 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rom1P32958 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rom1P32958 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rom1P32958 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Rom1P32958 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rom1P32958 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rom1P32958 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Rom1P32958 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rom1P32958 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rom1P32958 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC13.2□□□□□ -0.3
Rom1P32958 Gm18671-201ENSMUST00000214826 683 ntBASIC13.2□□□□□ -0.3
Rom1P32958 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC13.2□□□□□ -0.3
Rom1P32958 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rom1P32958 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rom1P32958 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rom1P32958 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rom1P32958 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rom1P32958 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rom1P32958 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rom1P32958 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rom1P32958 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rom1P32958 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Rom1P32958 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rom1P32958 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rom1P32958 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rom1P32958 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rom1P32958 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rom1P32958 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Rom1P32958 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rom1P32958 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rom1P32958 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rom1P32958 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.19□□□□□ -0.3
Rom1P32958 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rom1P32958 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rom1P32958 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rom1P32958 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rom1P32958 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rom1P32958 Gm15847-201ENSMUST00000121417 1065 ntBASIC13.19□□□□□ -0.3
Rom1P32958 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rom1P32958 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rom1P32958 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rom1P32958 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rom1P32958 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.19□□□□□ -0.3
Rom1P32958 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rom1P32958 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rom1P32958 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.19□□□□□ -0.3
Rom1P32958 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rom1P32958 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rom1P32958 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rom1P32958 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rom1P32958 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rom1P32958 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rom1P32958 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rom1P32958 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Rom1P32958 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Rom1P32958 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rom1P32958 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rom1P32958 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rom1P32958 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rom1P32958 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rom1P32958 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rom1P32958 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rom1P32958 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rom1P32958 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rom1P32958 CT010444.2-201ENSMUST00000217877 1629 ntBASIC13.18□□□□□ -0.3
Rom1P32958 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rom1P32958 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.18□□□□□ -0.3
Rom1P32958 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rom1P32958 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rom1P32958 Gm15375-201ENSMUST00000119510 849 ntBASIC13.18□□□□□ -0.3
Rom1P32958 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rom1P32958 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rom1P32958 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC13.18□□□□□ -0.3
Rom1P32958 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC13.18□□□□□ -0.3
Rom1P32958 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Rom1P32958 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rom1P32958 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rom1P32958 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rom1P32958 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rom1P32958 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rom1P32958 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rom1P32958 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rom1P32958 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rom1P32958 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms