Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slc6a11P31650 Gm27741-201ENSMUST00000185060 237 ntBASIC15.8■□□□□ 0.12
Slc6a11P31650 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.8■□□□□ 0.12
Slc6a11P31650 Gm4974-201ENSMUST00000209974 875 ntBASIC15.8■□□□□ 0.12
Slc6a11P31650 Timm23-208ENSMUST00000226683 750 ntBASIC15.8■□□□□ 0.12
Slc6a11P31650 Odf3b-204ENSMUST00000227834 930 ntBASIC15.8■□□□□ 0.12
Slc6a11P31650 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slc6a11P31650 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Slc6a11P31650 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slc6a11P31650 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slc6a11P31650 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Slc6a11P31650 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slc6a11P31650 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slc6a11P31650 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slc6a11P31650 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slc6a11P31650 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slc6a11P31650 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slc6a11P31650 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slc6a11P31650 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slc6a11P31650 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slc6a11P31650 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.79■□□□□ 0.12
Slc6a11P31650 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slc6a11P31650 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slc6a11P31650 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slc6a11P31650 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Slc6a11P31650 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.79■□□□□ 0.12
Slc6a11P31650 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slc6a11P31650 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.79■□□□□ 0.12
Slc6a11P31650 Gm11539-201ENSMUST00000119837 557 ntBASIC15.79■□□□□ 0.12
Slc6a11P31650 Gm13436-201ENSMUST00000120418 567 ntBASIC15.79■□□□□ 0.12
Slc6a11P31650 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Slc6a11P31650 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.79■□□□□ 0.12
Slc6a11P31650 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slc6a11P31650 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.79■□□□□ 0.12
Slc6a11P31650 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slc6a11P31650 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slc6a11P31650 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slc6a11P31650 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slc6a11P31650 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slc6a11P31650 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Slc6a11P31650 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slc6a11P31650 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Slc6a11P31650 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.79■□□□□ 0.12
Slc6a11P31650 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Slc6a11P31650 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Slc6a11P31650 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc6a11P31650 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc6a11P31650 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.78■□□□□ 0.12
Slc6a11P31650 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Slc6a11P31650 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc6a11P31650 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc6a11P31650 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc6a11P31650 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.78■□□□□ 0.12
Slc6a11P31650 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Slc6a11P31650 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc6a11P31650 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc6a11P31650 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Slc6a11P31650 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc6a11P31650 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Slc6a11P31650 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc6a11P31650 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc6a11P31650 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc6a11P31650 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Slc6a11P31650 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.78■□□□□ 0.12
Slc6a11P31650 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Slc6a11P31650 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc6a11P31650 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Slc6a11P31650 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc6a11P31650 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Slc6a11P31650 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc6a11P31650 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Slc6a11P31650 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.78■□□□□ 0.12
Slc6a11P31650 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.78■□□□□ 0.12
Slc6a11P31650 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Slc6a11P31650 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Slc6a11P31650 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Slc6a11P31650 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Slc6a11P31650 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Slc6a11P31650 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Slc6a11P31650 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Slc6a11P31650 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Slc6a11P31650 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
Slc6a11P31650 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Slc6a11P31650 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Slc6a11P31650 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Slc6a11P31650 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
Slc6a11P31650 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Slc6a11P31650 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Slc6a11P31650 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Slc6a11P31650 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Slc6a11P31650 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.77■□□□□ 0.12
Slc6a11P31650 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Slc6a11P31650 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Slc6a11P31650 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.77■□□□□ 0.12
Slc6a11P31650 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Slc6a11P31650 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Slc6a11P31650 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.11
Slc6a11P31650 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Slc6a11P31650 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Slc6a11P31650 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms