Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC19.09■□□□□ 0.65
Vcam1P29533 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Vcam1P29533 AC114585.2-202ENSMUST00000228094 426 ntBASIC19.09■□□□□ 0.65
Vcam1P29533 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vcam1P29533 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Vcam1P29533 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Vcam1P29533 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Vcam1P29533 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Vcam1P29533 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.09■□□□□ 0.65
Vcam1P29533 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vcam1P29533 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vcam1P29533 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Vcam1P29533 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Vcam1P29533 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Vcam1P29533 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Vcam1P29533 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC19.08■□□□□ 0.64
Vcam1P29533 Gm7862-201ENSMUST00000121461 292 ntBASIC19.08■□□□□ 0.64
Vcam1P29533 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC19.08■□□□□ 0.64
Vcam1P29533 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC19.08■□□□□ 0.64
Vcam1P29533 Gm36967-201ENSMUST00000193814 266 ntBASIC19.08■□□□□ 0.64
Vcam1P29533 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Vcam1P29533 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC19.08■□□□□ 0.64
Vcam1P29533 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Vcam1P29533 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Vcam1P29533 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Vcam1P29533 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Vcam1P29533 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Vcam1P29533 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Vcam1P29533 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Vcam1P29533 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Vcam1P29533 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vcam1P29533 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vcam1P29533 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Vcam1P29533 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vcam1P29533 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.07■□□□□ 0.64
Vcam1P29533 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vcam1P29533 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vcam1P29533 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC19.07■□□□□ 0.64
Vcam1P29533 Gm7507-201ENSMUST00000183053 1008 ntBASIC19.07■□□□□ 0.64
Vcam1P29533 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC19.07■□□□□ 0.64
Vcam1P29533 Gm9449-201ENSMUST00000207265 1011 ntBASIC19.07■□□□□ 0.64
Vcam1P29533 Gm6376-201ENSMUST00000209407 580 ntBASIC19.07■□□□□ 0.64
Vcam1P29533 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC19.07■□□□□ 0.64
Vcam1P29533 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Vcam1P29533 AC127349.1-201ENSMUST00000224590 266 ntBASIC19.07■□□□□ 0.64
Vcam1P29533 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vcam1P29533 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.07■□□□□ 0.64
Vcam1P29533 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vcam1P29533 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vcam1P29533 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vcam1P29533 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Vcam1P29533 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vcam1P29533 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Vcam1P29533 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.06■□□□□ 0.64
Vcam1P29533 Gm18733-201ENSMUST00000173950 856 ntBASIC19.06■□□□□ 0.64
Vcam1P29533 Gm25745-201ENSMUST00000174945 133 ntBASIC19.06■□□□□ 0.64
Vcam1P29533 Gm43514-201ENSMUST00000198852 424 ntBASIC19.06■□□□□ 0.64
Vcam1P29533 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC19.06■□□□□ 0.64
Vcam1P29533 Gm6443-201ENSMUST00000203599 874 ntBASIC19.06■□□□□ 0.64
Vcam1P29533 Gm18195-201ENSMUST00000207604 706 ntBASIC19.06■□□□□ 0.64
Vcam1P29533 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC19.06■□□□□ 0.64
Vcam1P29533 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vcam1P29533 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vcam1P29533 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Vcam1P29533 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vcam1P29533 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vcam1P29533 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vcam1P29533 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vcam1P29533 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Vcam1P29533 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vcam1P29533 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC19.05■□□□□ 0.64
Vcam1P29533 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vcam1P29533 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC19.05■□□□□ 0.64
Vcam1P29533 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Vcam1P29533 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vcam1P29533 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vcam1P29533 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Vcam1P29533 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vcam1P29533 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vcam1P29533 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vcam1P29533 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vcam1P29533 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.05■□□□□ 0.64
Vcam1P29533 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vcam1P29533 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vcam1P29533 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.04■□□□□ 0.64
Vcam1P29533 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vcam1P29533 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vcam1P29533 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Vcam1P29533 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.04■□□□□ 0.64
Vcam1P29533 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Vcam1P29533 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vcam1P29533 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC19.04■□□□□ 0.64
Vcam1P29533 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Vcam1P29533 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC19.04■□□□□ 0.64
Vcam1P29533 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vcam1P29533 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Vcam1P29533 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vcam1P29533 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Vcam1P29533 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vcam1P29533 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms