Protein–RNA interactions for Protein: P28236

Gja8, Gap junction alpha-8 protein, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gja8P28236 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Gja8P28236 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC18.52■□□□□ 0.56
Gja8P28236 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.52■□□□□ 0.56
Gja8P28236 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC18.52■□□□□ 0.56
Gja8P28236 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC18.52■□□□□ 0.56
Gja8P28236 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gja8P28236 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Gja8P28236 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gja8P28236 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Gja8P28236 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gja8P28236 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.52■□□□□ 0.55
Gja8P28236 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gja8P28236 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gja8P28236 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gja8P28236 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gja8P28236 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Gja8P28236 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gja8P28236 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Gja8P28236 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gja8P28236 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Gja8P28236 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gja8P28236 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gja8P28236 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gja8P28236 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gja8P28236 Gm12260-201ENSMUST00000122447 411 ntBASIC18.51■□□□□ 0.55
Gja8P28236 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gja8P28236 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gja8P28236 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.51■□□□□ 0.55
Gja8P28236 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gja8P28236 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gja8P28236 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gja8P28236 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Gja8P28236 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gja8P28236 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Gja8P28236 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gja8P28236 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gja8P28236 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gja8P28236 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC18.5■□□□□ 0.55
Gja8P28236 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gja8P28236 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gja8P28236 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gja8P28236 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gja8P28236 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gja8P28236 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gja8P28236 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.5■□□□□ 0.55
Gja8P28236 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gja8P28236 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.5■□□□□ 0.55
Gja8P28236 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gja8P28236 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.5■□□□□ 0.55
Gja8P28236 AC225888.1-201ENSMUST00000227184 728 ntBASIC18.5■□□□□ 0.55
Gja8P28236 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gja8P28236 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gja8P28236 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gja8P28236 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Gja8P28236 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gja8P28236 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Gja8P28236 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gja8P28236 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gja8P28236 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Gja8P28236 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gja8P28236 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Gja8P28236 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gja8P28236 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gja8P28236 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gja8P28236 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gja8P28236 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gja8P28236 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gja8P28236 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Gja8P28236 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gja8P28236 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gja8P28236 Gm14494-201ENSMUST00000118786 435 ntBASIC18.49■□□□□ 0.55
Gja8P28236 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.49■□□□□ 0.55
Gja8P28236 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC18.49■□□□□ 0.55
Gja8P28236 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Gja8P28236 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gja8P28236 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gja8P28236 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gja8P28236 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Gja8P28236 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gja8P28236 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Gja8P28236 Phf7-203ENSMUST00000226565 1971 ntBASIC18.49■□□□□ 0.55
Gja8P28236 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gja8P28236 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gja8P28236 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Gja8P28236 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gja8P28236 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Gja8P28236 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gja8P28236 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Gja8P28236 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gja8P28236 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gja8P28236 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gja8P28236 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Gja8P28236 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Gja8P28236 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gja8P28236 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Gja8P28236 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gja8P28236 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gja8P28236 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Gja8P28236 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gja8P28236 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms