Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Pde6aP27664 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.3■□□□□ 0.68
Pde6aP27664 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pde6aP27664 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pde6aP27664 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pde6aP27664 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pde6aP27664 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.29■□□□□ 0.68
Pde6aP27664 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Pde6aP27664 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pde6aP27664 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pde6aP27664 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pde6aP27664 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pde6aP27664 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.29■□□□□ 0.68
Pde6aP27664 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
Pde6aP27664 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Pde6aP27664 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Pde6aP27664 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pde6aP27664 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.29■□□□□ 0.68
Pde6aP27664 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Pde6aP27664 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Pde6aP27664 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pde6aP27664 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pde6aP27664 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Pde6aP27664 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pde6aP27664 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pde6aP27664 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.28■□□□□ 0.68
Pde6aP27664 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pde6aP27664 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pde6aP27664 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Pde6aP27664 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Pde6aP27664 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pde6aP27664 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pde6aP27664 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pde6aP27664 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Pde6aP27664 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.28■□□□□ 0.68
Pde6aP27664 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pde6aP27664 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pde6aP27664 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pde6aP27664 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pde6aP27664 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pde6aP27664 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Pde6aP27664 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pde6aP27664 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pde6aP27664 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Pde6aP27664 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pde6aP27664 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Pde6aP27664 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.27■□□□□ 0.68
Pde6aP27664 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Pde6aP27664 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Pde6aP27664 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pde6aP27664 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pde6aP27664 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pde6aP27664 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pde6aP27664 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pde6aP27664 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pde6aP27664 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pde6aP27664 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Pde6aP27664 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Pde6aP27664 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pde6aP27664 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pde6aP27664 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
Pde6aP27664 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pde6aP27664 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pde6aP27664 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pde6aP27664 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Pde6aP27664 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pde6aP27664 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pde6aP27664 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.26■□□□□ 0.67
Pde6aP27664 Gm29518-201ENSMUST00000190858 372 ntBASIC19.26■□□□□ 0.67
Pde6aP27664 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pde6aP27664 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pde6aP27664 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pde6aP27664 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pde6aP27664 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pde6aP27664 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Pde6aP27664 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pde6aP27664 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pde6aP27664 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.25■□□□□ 0.67
Pde6aP27664 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Pde6aP27664 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
Pde6aP27664 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pde6aP27664 Gm25016-201ENSMUST00000158399 131 ntBASIC19.25■□□□□ 0.67
Pde6aP27664 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Pde6aP27664 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Pde6aP27664 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pde6aP27664 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.25■□□□□ 0.67
Pde6aP27664 Gm17808-201ENSMUST00000200859 894 ntBASIC19.25■□□□□ 0.67
Pde6aP27664 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Pde6aP27664 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pde6aP27664 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pde6aP27664 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pde6aP27664 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pde6aP27664 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Pde6aP27664 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pde6aP27664 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pde6aP27664 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pde6aP27664 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pde6aP27664 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pde6aP27664 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Pde6aP27664 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms