Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nfkb1P25799 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nfkb1P25799 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Nfkb1P25799 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nfkb1P25799 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nfkb1P25799 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nfkb1P25799 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nfkb1P25799 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Nfkb1P25799 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nfkb1P25799 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nfkb1P25799 Gm29707-201ENSMUST00000196325 491 ntBASIC17.07■□□□□ 0.32
Nfkb1P25799 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nfkb1P25799 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Nfkb1P25799 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nfkb1P25799 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nfkb1P25799 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nfkb1P25799 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nfkb1P25799 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nfkb1P25799 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nfkb1P25799 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nfkb1P25799 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Nfkb1P25799 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.06■□□□□ 0.32
Nfkb1P25799 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nfkb1P25799 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Nfkb1P25799 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.06■□□□□ 0.32
Nfkb1P25799 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nfkb1P25799 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nfkb1P25799 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nfkb1P25799 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nfkb1P25799 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Nfkb1P25799 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nfkb1P25799 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nfkb1P25799 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nfkb1P25799 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nfkb1P25799 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Nfkb1P25799 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nfkb1P25799 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.06■□□□□ 0.32
Nfkb1P25799 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Nfkb1P25799 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nfkb1P25799 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nfkb1P25799 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nfkb1P25799 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nfkb1P25799 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nfkb1P25799 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nfkb1P25799 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Nfkb1P25799 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Nfkb1P25799 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nfkb1P25799 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nfkb1P25799 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nfkb1P25799 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nfkb1P25799 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nfkb1P25799 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nfkb1P25799 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Nfkb1P25799 Gm7153-201ENSMUST00000117092 455 ntBASIC17.05■□□□□ 0.32
Nfkb1P25799 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Nfkb1P25799 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.05■□□□□ 0.32
Nfkb1P25799 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Nfkb1P25799 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.05■□□□□ 0.32
Nfkb1P25799 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nfkb1P25799 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.05■□□□□ 0.32
Nfkb1P25799 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Nfkb1P25799 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nfkb1P25799 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Nfkb1P25799 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nfkb1P25799 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.04■□□□□ 0.32
Nfkb1P25799 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nfkb1P25799 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nfkb1P25799 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.04■□□□□ 0.32
Nfkb1P25799 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Nfkb1P25799 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Nfkb1P25799 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Nfkb1P25799 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nfkb1P25799 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nfkb1P25799 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.04■□□□□ 0.32
Nfkb1P25799 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nfkb1P25799 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nfkb1P25799 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nfkb1P25799 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nfkb1P25799 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nfkb1P25799 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.04■□□□□ 0.32
Nfkb1P25799 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nfkb1P25799 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nfkb1P25799 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nfkb1P25799 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nfkb1P25799 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nfkb1P25799 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nfkb1P25799 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nfkb1P25799 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.03■□□□□ 0.32
Nfkb1P25799 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Nfkb1P25799 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nfkb1P25799 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Nfkb1P25799 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nfkb1P25799 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nfkb1P25799 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Nfkb1P25799 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Nfkb1P25799 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nfkb1P25799 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nfkb1P25799 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Nfkb1P25799 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.03■□□□□ 0.32
Nfkb1P25799 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms