Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.13■□□□□ 0.33
Hoxd8P23463 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxd8P23463 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxd8P23463 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxd8P23463 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxd8P23463 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.12■□□□□ 0.33
Hoxd8P23463 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxd8P23463 Gm10060-201ENSMUST00000212002 111 ntBASIC17.12■□□□□ 0.33
Hoxd8P23463 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxd8P23463 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Hoxd8P23463 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxd8P23463 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxd8P23463 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Hoxd8P23463 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.12■□□□□ 0.33
Hoxd8P23463 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Hoxd8P23463 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxd8P23463 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxd8P23463 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxd8P23463 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Hoxd8P23463 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxd8P23463 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxd8P23463 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxd8P23463 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxd8P23463 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Hoxd8P23463 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxd8P23463 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxd8P23463 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxd8P23463 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxd8P23463 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxd8P23463 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxd8P23463 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Hoxd8P23463 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Hoxd8P23463 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxd8P23463 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxd8P23463 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxd8P23463 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxd8P23463 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.1■□□□□ 0.33
Hoxd8P23463 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxd8P23463 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Hoxd8P23463 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Hoxd8P23463 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxd8P23463 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Hoxd8P23463 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxd8P23463 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.1■□□□□ 0.33
Hoxd8P23463 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.1■□□□□ 0.33
Hoxd8P23463 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxd8P23463 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxd8P23463 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxd8P23463 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Hoxd8P23463 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxd8P23463 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxd8P23463 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxd8P23463 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxd8P23463 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxd8P23463 Gm12350-201ENSMUST00000121208 462 ntBASIC17.09■□□□□ 0.33
Hoxd8P23463 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxd8P23463 Gm4535-201ENSMUST00000182274 558 ntBASIC17.09■□□□□ 0.33
Hoxd8P23463 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.09■□□□□ 0.33
Hoxd8P23463 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.09■□□□□ 0.33
Hoxd8P23463 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.09■□□□□ 0.33
Hoxd8P23463 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.09■□□□□ 0.33
Hoxd8P23463 Gm7506-201ENSMUST00000207758 815 ntBASIC17.09■□□□□ 0.33
Hoxd8P23463 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxd8P23463 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.09■□□□□ 0.33
Hoxd8P23463 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxd8P23463 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxd8P23463 Gm10355-201ENSMUST00000097146 517 ntBASIC17.09■□□□□ 0.33
Hoxd8P23463 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxd8P23463 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxd8P23463 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxd8P23463 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxd8P23463 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxd8P23463 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxd8P23463 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.09■□□□□ 0.33
Hoxd8P23463 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxd8P23463 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hoxd8P23463 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Hoxd8P23463 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hoxd8P23463 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hoxd8P23463 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxd8P23463 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxd8P23463 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxd8P23463 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxd8P23463 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxd8P23463 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxd8P23463 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxd8P23463 Gm12497-201ENSMUST00000138778 237 ntBASIC17.08■□□□□ 0.32
Hoxd8P23463 Mir5131-201ENSMUST00000175426 93 ntBASIC17.08■□□□□ 0.32
Hoxd8P23463 Gm5186-201ENSMUST00000218781 920 ntBASIC17.08■□□□□ 0.32
Hoxd8P23463 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.08■□□□□ 0.32
Hoxd8P23463 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.08■□□□□ 0.32
Hoxd8P23463 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxd8P23463 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxd8P23463 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxd8P23463 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxd8P23463 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxd8P23463 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxd8P23463 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxd8P23463 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxd8P23463 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms