Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pde6bP23440 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.1■□□□□ 0.49
Pde6bP23440 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pde6bP23440 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pde6bP23440 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Pde6bP23440 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pde6bP23440 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Pde6bP23440 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Pde6bP23440 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Pde6bP23440 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pde6bP23440 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pde6bP23440 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pde6bP23440 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Pde6bP23440 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Pde6bP23440 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pde6bP23440 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pde6bP23440 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pde6bP23440 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.09■□□□□ 0.49
Pde6bP23440 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.09■□□□□ 0.49
Pde6bP23440 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pde6bP23440 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.09■□□□□ 0.49
Pde6bP23440 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.09■□□□□ 0.49
Pde6bP23440 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.09■□□□□ 0.49
Pde6bP23440 Birc2-201ENSMUST00000054878 378 ntBASIC18.09■□□□□ 0.49
Pde6bP23440 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pde6bP23440 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pde6bP23440 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pde6bP23440 Phf7-203ENSMUST00000226565 1971 ntBASIC18.09■□□□□ 0.49
Pde6bP23440 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pde6bP23440 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.09■□□□□ 0.49
Pde6bP23440 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pde6bP23440 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pde6bP23440 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.09■□□□□ 0.49
Pde6bP23440 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pde6bP23440 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pde6bP23440 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pde6bP23440 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.09■□□□□ 0.49
Pde6bP23440 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pde6bP23440 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
Pde6bP23440 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pde6bP23440 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Pde6bP23440 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pde6bP23440 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pde6bP23440 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pde6bP23440 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
Pde6bP23440 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pde6bP23440 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pde6bP23440 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.08■□□□□ 0.48
Pde6bP23440 Gm34391-201ENSMUST00000203706 907 ntBASIC18.08■□□□□ 0.48
Pde6bP23440 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pde6bP23440 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pde6bP23440 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pde6bP23440 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.08■□□□□ 0.48
Pde6bP23440 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Pde6bP23440 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pde6bP23440 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pde6bP23440 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pde6bP23440 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pde6bP23440 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pde6bP23440 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pde6bP23440 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pde6bP23440 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pde6bP23440 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.07■□□□□ 0.48
Pde6bP23440 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.07■□□□□ 0.48
Pde6bP23440 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.07■□□□□ 0.48
Pde6bP23440 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
Pde6bP23440 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.07■□□□□ 0.48
Pde6bP23440 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pde6bP23440 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pde6bP23440 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pde6bP23440 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pde6bP23440 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pde6bP23440 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pde6bP23440 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pde6bP23440 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pde6bP23440 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pde6bP23440 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.06■□□□□ 0.48
Pde6bP23440 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pde6bP23440 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pde6bP23440 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pde6bP23440 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pde6bP23440 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pde6bP23440 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pde6bP23440 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pde6bP23440 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.06■□□□□ 0.48
Pde6bP23440 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Pde6bP23440 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Pde6bP23440 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pde6bP23440 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pde6bP23440 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pde6bP23440 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.06■□□□□ 0.48
Pde6bP23440 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.06■□□□□ 0.48
Pde6bP23440 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pde6bP23440 Gm44771-201ENSMUST00000206975 626 ntBASIC18.06■□□□□ 0.48
Pde6bP23440 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
Pde6bP23440 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.06■□□□□ 0.48
Pde6bP23440 Mzt1-203ENSMUST00000227948 952 ntBASIC18.06■□□□□ 0.48
Pde6bP23440 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pde6bP23440 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Pde6bP23440 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms