Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Mir3081-201ENSMUST00000175305 84 ntBASIC13.54□□□□□ -0.24
Tnfrsf9P20334 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.54□□□□□ -0.24
Tnfrsf9P20334 Spsb2-203ENSMUST00000112473 1322 ntBASIC13.54□□□□□ -0.24
Tnfrsf9P20334 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Tnfrsf9P20334 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tnfrsf9P20334 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Tnfrsf9P20334 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Tnfrsf9P20334 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tnfrsf9P20334 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tnfrsf9P20334 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.54□□□□□ -0.24
Tnfrsf9P20334 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tnfrsf9P20334 Gm37820-201ENSMUST00000194021 2147 ntBASIC13.54□□□□□ -0.24
Tnfrsf9P20334 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Tnfrsf9P20334 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tnfrsf9P20334 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Tnfrsf9P20334 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfrsf9P20334 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfrsf9P20334 Zcchc6-207ENSMUST00000225576 2499 ntBASIC13.53□□□□□ -0.24
Tnfrsf9P20334 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfrsf9P20334 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfrsf9P20334 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfrsf9P20334 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfrsf9P20334 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfrsf9P20334 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfrsf9P20334 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.53□□□□□ -0.24
Tnfrsf9P20334 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfrsf9P20334 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Tnfrsf9P20334 Gm7213-201ENSMUST00000215977 950 ntBASIC13.53□□□□□ -0.24
Tnfrsf9P20334 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Tnfrsf9P20334 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfrsf9P20334 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfrsf9P20334 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.53□□□□□ -0.24
Tnfrsf9P20334 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfrsf9P20334 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfrsf9P20334 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfrsf9P20334 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
Tnfrsf9P20334 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfrsf9P20334 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfrsf9P20334 AC121961.1-201ENSMUST00000218594 1779 ntBASIC13.53□□□□□ -0.24
Tnfrsf9P20334 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfrsf9P20334 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfrsf9P20334 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC13.52□□□□□ -0.24
Tnfrsf9P20334 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tnfrsf9P20334 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tnfrsf9P20334 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tnfrsf9P20334 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tnfrsf9P20334 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC13.52□□□□□ -0.24
Tnfrsf9P20334 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tnfrsf9P20334 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Tnfrsf9P20334 Fcho2-208ENSMUST00000224992 2964 ntBASIC13.52□□□□□ -0.24
Tnfrsf9P20334 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tnfrsf9P20334 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.52□□□□□ -0.25
Tnfrsf9P20334 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf9P20334 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf9P20334 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC13.52□□□□□ -0.25
Tnfrsf9P20334 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf9P20334 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf9P20334 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf9P20334 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Tnfrsf9P20334 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf9P20334 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf9P20334 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Tnfrsf9P20334 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf9P20334 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Tnfrsf9P20334 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.52□□□□□ -0.25
Tnfrsf9P20334 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf9P20334 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf9P20334 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf9P20334 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf9P20334 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf9P20334 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf9P20334 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf9P20334 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf9P20334 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf9P20334 Gm38345-201ENSMUST00000192635 1748 ntBASIC13.51□□□□□ -0.25
Tnfrsf9P20334 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf9P20334 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf9P20334 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Tnfrsf9P20334 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf9P20334 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Tnfrsf9P20334 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf9P20334 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.51□□□□□ -0.25
Tnfrsf9P20334 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf9P20334 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf9P20334 Mir1668-201ENSMUST00000184114 107 ntBASIC13.51□□□□□ -0.25
Tnfrsf9P20334 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf9P20334 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf9P20334 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf9P20334 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Tnfrsf9P20334 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf9P20334 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf9P20334 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf9P20334 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.51□□□□□ -0.25
Tnfrsf9P20334 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf9P20334 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf9P20334 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf9P20334 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf9P20334 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf9P20334 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf9P20334 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms