Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdx1P18111 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Cdx1P18111 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdx1P18111 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdx1P18111 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cdx1P18111 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdx1P18111 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdx1P18111 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.45□□□□□ -0.26
Cdx1P18111 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdx1P18111 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Cdx1P18111 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdx1P18111 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Cdx1P18111 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Cdx1P18111 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdx1P18111 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cdx1P18111 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdx1P18111 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdx1P18111 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdx1P18111 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdx1P18111 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Cdx1P18111 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdx1P18111 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.44□□□□□ -0.26
Cdx1P18111 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdx1P18111 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdx1P18111 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC13.44□□□□□ -0.26
Cdx1P18111 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cdx1P18111 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Cdx1P18111 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cdx1P18111 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Cdx1P18111 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cdx1P18111 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdx1P18111 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdx1P18111 Gm5643-201ENSMUST00000117081 966 ntBASIC13.44□□□□□ -0.26
Cdx1P18111 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cdx1P18111 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC13.44□□□□□ -0.26
Cdx1P18111 Gm27275-201ENSMUST00000184318 272 ntBASIC13.44□□□□□ -0.26
Cdx1P18111 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdx1P18111 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC13.44□□□□□ -0.26
Cdx1P18111 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdx1P18111 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdx1P18111 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdx1P18111 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdx1P18111 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdx1P18111 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdx1P18111 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
Cdx1P18111 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Cdx1P18111 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdx1P18111 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cdx1P18111 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Cdx1P18111 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cdx1P18111 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdx1P18111 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdx1P18111 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdx1P18111 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdx1P18111 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cdx1P18111 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdx1P18111 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cdx1P18111 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdx1P18111 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdx1P18111 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdx1P18111 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdx1P18111 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdx1P18111 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdx1P18111 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.43□□□□□ -0.26
Cdx1P18111 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Cdx1P18111 Mir7071-201ENSMUST00000184847 69 ntBASIC13.43□□□□□ -0.26
Cdx1P18111 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdx1P18111 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC13.43□□□□□ -0.26
Cdx1P18111 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdx1P18111 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdx1P18111 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdx1P18111 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdx1P18111 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
Cdx1P18111 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cdx1P18111 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cdx1P18111 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdx1P18111 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdx1P18111 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdx1P18111 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Cdx1P18111 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdx1P18111 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdx1P18111 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdx1P18111 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdx1P18111 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdx1P18111 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdx1P18111 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Cdx1P18111 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Cdx1P18111 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdx1P18111 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Cdx1P18111 Dio3-201ENSMUST00000097228 1449 ntBASIC13.42□□□□□ -0.26
Cdx1P18111 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cdx1P18111 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC13.42□□□□□ -0.26
Cdx1P18111 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdx1P18111 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdx1P18111 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cdx1P18111 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC13.42□□□□□ -0.26
Cdx1P18111 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdx1P18111 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.42□□□□□ -0.26
Cdx1P18111 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Cdx1P18111 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms