Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl1P12850 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl1P12850 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl1P12850 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl1P12850 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl1P12850 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Cxcl1P12850 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl1P12850 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl1P12850 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl1P12850 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl1P12850 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl1P12850 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl1P12850 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl1P12850 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Cxcl1P12850 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl1P12850 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl1P12850 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl1P12850 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl1P12850 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl1P12850 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl1P12850 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.8□□□□□ -0.2
Cxcl1P12850 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Cxcl1P12850 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Cxcl1P12850 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl1P12850 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl1P12850 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl1P12850 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl1P12850 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl1P12850 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC13.79□□□□□ -0.2
Cxcl1P12850 Gm18666-201ENSMUST00000190039 958 ntBASIC13.79□□□□□ -0.2
Cxcl1P12850 Gm43183-201ENSMUST00000200632 547 ntBASIC13.79□□□□□ -0.2
Cxcl1P12850 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13.79□□□□□ -0.2
Cxcl1P12850 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl1P12850 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl1P12850 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl1P12850 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl1P12850 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl1P12850 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl1P12850 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl1P12850 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl1P12850 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Cxcl1P12850 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl1P12850 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl1P12850 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl1P12850 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl1P12850 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl1P12850 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl1P12850 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl1P12850 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl1P12850 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl1P12850 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl1P12850 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl1P12850 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC13.78□□□□□ -0.2
Cxcl1P12850 H2-K2-201ENSMUST00000174250 1049 ntBASIC13.78□□□□□ -0.2
Cxcl1P12850 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC13.78□□□□□ -0.2
Cxcl1P12850 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cxcl1P12850 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.78□□□□□ -0.2
Cxcl1P12850 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC13.78□□□□□ -0.2
Cxcl1P12850 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
Cxcl1P12850 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl1P12850 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl1P12850 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Cxcl1P12850 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl1P12850 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cxcl1P12850 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl1P12850 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl1P12850 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl1P12850 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl1P12850 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl1P12850 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl1P12850 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Cxcl1P12850 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl1P12850 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl1P12850 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl1P12850 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl1P12850 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl1P12850 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl1P12850 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl1P12850 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cxcl1P12850 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cxcl1P12850 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cxcl1P12850 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Cxcl1P12850 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cxcl1P12850 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cxcl1P12850 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cxcl1P12850 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cxcl1P12850 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cxcl1P12850 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cxcl1P12850 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC13.77□□□□□ -0.21
Cxcl1P12850 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cxcl1P12850 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cxcl1P12850 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cxcl1P12850 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC13.77□□□□□ -0.21
Cxcl1P12850 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cxcl1P12850 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.77□□□□□ -0.21
Cxcl1P12850 Gm9731-201ENSMUST00000209480 747 ntBASIC13.77□□□□□ -0.21
Cxcl1P12850 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cxcl1P12850 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC13.77□□□□□ -0.21
Cxcl1P12850 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cxcl1P12850 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms