Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccl3P10855 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Ccl3P10855 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccl3P10855 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccl3P10855 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccl3P10855 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccl3P10855 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccl3P10855 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.68□□□□□ -0.06
Ccl3P10855 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccl3P10855 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccl3P10855 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccl3P10855 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccl3P10855 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccl3P10855 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.68□□□□□ -0.06
Ccl3P10855 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Ccl3P10855 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.68□□□□□ -0.06
Ccl3P10855 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.68□□□□□ -0.06
Ccl3P10855 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.68□□□□□ -0.06
Ccl3P10855 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ccl3P10855 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ccl3P10855 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccl3P10855 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccl3P10855 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ccl3P10855 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ccl3P10855 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.68□□□□□ -0.06
Ccl3P10855 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.68□□□□□ -0.06
Ccl3P10855 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccl3P10855 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccl3P10855 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccl3P10855 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.67□□□□□ -0.06
Ccl3P10855 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Ccl3P10855 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccl3P10855 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccl3P10855 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccl3P10855 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccl3P10855 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccl3P10855 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ccl3P10855 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Ccl3P10855 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.67□□□□□ -0.06
Ccl3P10855 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ccl3P10855 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccl3P10855 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.67□□□□□ -0.06
Ccl3P10855 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.67□□□□□ -0.06
Ccl3P10855 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.67□□□□□ -0.06
Ccl3P10855 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccl3P10855 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccl3P10855 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ccl3P10855 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.67□□□□□ -0.06
Ccl3P10855 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Ccl3P10855 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccl3P10855 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ccl3P10855 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccl3P10855 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccl3P10855 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccl3P10855 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccl3P10855 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccl3P10855 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccl3P10855 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccl3P10855 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Ccl3P10855 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccl3P10855 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccl3P10855 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Ccl3P10855 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.66□□□□□ -0.06
Ccl3P10855 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccl3P10855 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.66□□□□□ -0.06
Ccl3P10855 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.66□□□□□ -0.06
Ccl3P10855 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccl3P10855 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccl3P10855 Gm8000-201ENSMUST00000188378 592 ntBASIC14.66□□□□□ -0.06
Ccl3P10855 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccl3P10855 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.66□□□□□ -0.06
Ccl3P10855 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.66□□□□□ -0.06
Ccl3P10855 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.66□□□□□ -0.06
Ccl3P10855 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccl3P10855 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccl3P10855 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccl3P10855 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccl3P10855 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Ccl3P10855 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccl3P10855 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccl3P10855 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccl3P10855 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccl3P10855 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.65□□□□□ -0.06
Ccl3P10855 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccl3P10855 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ccl3P10855 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ccl3P10855 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccl3P10855 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccl3P10855 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14.65□□□□□ -0.06
Ccl3P10855 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccl3P10855 Mir5126-201ENSMUST00000175513 77 ntBASIC14.65□□□□□ -0.06
Ccl3P10855 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccl3P10855 Gm5364-201ENSMUST00000216789 889 ntBASIC14.65□□□□□ -0.06
Ccl3P10855 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccl3P10855 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccl3P10855 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
Ccl3P10855 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.65□□□□□ -0.06
Ccl3P10855 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccl3P10855 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccl3P10855 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms