Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl1P10146 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl1P10146 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ccl1P10146 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl1P10146 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl1P10146 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Ccl1P10146 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl1P10146 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl1P10146 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl1P10146 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl1P10146 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl1P10146 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl1P10146 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.98□□□□□ -0.33
Ccl1P10146 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl1P10146 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl1P10146 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Ccl1P10146 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl1P10146 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ccl1P10146 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl1P10146 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl1P10146 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl1P10146 Gm13401-201ENSMUST00000117074 291 ntBASIC12.98□□□□□ -0.33
Ccl1P10146 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC12.98□□□□□ -0.33
Ccl1P10146 AC140264.2-202ENSMUST00000218746 817 ntBASIC12.98□□□□□ -0.33
Ccl1P10146 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl1P10146 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl1P10146 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl1P10146 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ccl1P10146 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.98□□□□□ -0.33
Ccl1P10146 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl1P10146 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl1P10146 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl1P10146 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl1P10146 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl1P10146 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl1P10146 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl1P10146 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl1P10146 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl1P10146 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ccl1P10146 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl1P10146 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccl1P10146 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccl1P10146 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccl1P10146 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ccl1P10146 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Ccl1P10146 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC12.97□□□□□ -0.33
Ccl1P10146 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccl1P10146 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccl1P10146 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ccl1P10146 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccl1P10146 Gm45417-201ENSMUST00000209533 758 ntBASIC12.97□□□□□ -0.33
Ccl1P10146 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccl1P10146 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Ccl1P10146 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.97□□□□□ -0.33
Ccl1P10146 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccl1P10146 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccl1P10146 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccl1P10146 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccl1P10146 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.97□□□□□ -0.33
Ccl1P10146 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccl1P10146 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccl1P10146 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.97□□□□□ -0.33
Ccl1P10146 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.97□□□□□ -0.33
Ccl1P10146 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccl1P10146 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.97□□□□□ -0.33
Ccl1P10146 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccl1P10146 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccl1P10146 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Ccl1P10146 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Ccl1P10146 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC12.96□□□□□ -0.33
Ccl1P10146 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccl1P10146 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC12.96□□□□□ -0.33
Ccl1P10146 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC12.96□□□□□ -0.33
Ccl1P10146 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccl1P10146 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccl1P10146 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Ccl1P10146 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccl1P10146 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccl1P10146 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccl1P10146 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccl1P10146 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Ccl1P10146 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccl1P10146 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.96□□□□□ -0.34
Ccl1P10146 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccl1P10146 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccl1P10146 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccl1P10146 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccl1P10146 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccl1P10146 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Ccl1P10146 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccl1P10146 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccl1P10146 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ccl1P10146 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccl1P10146 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC12.95□□□□□ -0.34
Ccl1P10146 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Ccl1P10146 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccl1P10146 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccl1P10146 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccl1P10146 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Ccl1P10146 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms