Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Smim1P0C8K7 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Smim1P0C8K7 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smim1P0C8K7 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smim1P0C8K7 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC11.52□□□□□ -0.57
Smim1P0C8K7 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smim1P0C8K7 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smim1P0C8K7 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smim1P0C8K7 AC108858.1-201ENSMUST00000228461 1498 ntBASIC11.51□□□□□ -0.57
Smim1P0C8K7 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smim1P0C8K7 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smim1P0C8K7 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smim1P0C8K7 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smim1P0C8K7 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smim1P0C8K7 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Smim1P0C8K7 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smim1P0C8K7 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smim1P0C8K7 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC11.51□□□□□ -0.57
Smim1P0C8K7 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC11.51□□□□□ -0.57
Smim1P0C8K7 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Smim1P0C8K7 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smim1P0C8K7 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smim1P0C8K7 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smim1P0C8K7 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC11.51□□□□□ -0.57
Smim1P0C8K7 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Smim1P0C8K7 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smim1P0C8K7 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC11.51□□□□□ -0.57
Smim1P0C8K7 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Smim1P0C8K7 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smim1P0C8K7 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Smim1P0C8K7 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smim1P0C8K7 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Smim1P0C8K7 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smim1P0C8K7 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Smim1P0C8K7 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smim1P0C8K7 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smim1P0C8K7 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smim1P0C8K7 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smim1P0C8K7 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smim1P0C8K7 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC11.5□□□□□ -0.57
Smim1P0C8K7 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smim1P0C8K7 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC11.5□□□□□ -0.57
Smim1P0C8K7 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smim1P0C8K7 Smad6-203ENSMUST00000179458 273 ntBASIC11.5□□□□□ -0.57
Smim1P0C8K7 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC11.5□□□□□ -0.57
Smim1P0C8K7 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC11.5□□□□□ -0.57
Smim1P0C8K7 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC11.5□□□□□ -0.57
Smim1P0C8K7 CT010467.1-202ENSMUST00000205406 714 ntBASIC11.5□□□□□ -0.57
Smim1P0C8K7 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC11.5□□□□□ -0.57
Smim1P0C8K7 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Smim1P0C8K7 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smim1P0C8K7 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smim1P0C8K7 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Smim1P0C8K7 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smim1P0C8K7 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smim1P0C8K7 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smim1P0C8K7 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Smim1P0C8K7 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Smim1P0C8K7 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC11.5□□□□□ -0.57
Smim1P0C8K7 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Smim1P0C8K7 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smim1P0C8K7 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Smim1P0C8K7 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Smim1P0C8K7 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Smim1P0C8K7 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smim1P0C8K7 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smim1P0C8K7 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Smim1P0C8K7 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smim1P0C8K7 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smim1P0C8K7 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smim1P0C8K7 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smim1P0C8K7 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smim1P0C8K7 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smim1P0C8K7 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smim1P0C8K7 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smim1P0C8K7 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Smim1P0C8K7 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smim1P0C8K7 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smim1P0C8K7 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Smim1P0C8K7 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Smim1P0C8K7 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC11.49□□□□□ -0.57
Smim1P0C8K7 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC11.49□□□□□ -0.57
Smim1P0C8K7 Flvcr1-202ENSMUST00000191946 1216 ntBASIC11.49□□□□□ -0.57
Smim1P0C8K7 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC11.49□□□□□ -0.57
Smim1P0C8K7 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smim1P0C8K7 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Smim1P0C8K7 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Smim1P0C8K7 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smim1P0C8K7 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Smim1P0C8K7 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Smim1P0C8K7 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smim1P0C8K7 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smim1P0C8K7 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smim1P0C8K7 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smim1P0C8K7 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smim1P0C8K7 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smim1P0C8K7 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smim1P0C8K7 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smim1P0C8K7 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Smim1P0C8K7 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms