Protein–RNA interactions for Protein: P09925

Surf1, Surfeit locus protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Surf1P09925 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Surf1P09925 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Surf1P09925 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Surf1P09925 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Surf1P09925 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.78■□□□□ 0.6
Surf1P09925 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Surf1P09925 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Surf1P09925 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Surf1P09925 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Surf1P09925 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Surf1P09925 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Surf1P09925 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Surf1P09925 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Surf1P09925 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.77■□□□□ 0.6
Surf1P09925 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Surf1P09925 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Surf1P09925 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Surf1P09925 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Surf1P09925 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Surf1P09925 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Surf1P09925 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Surf1P09925 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Surf1P09925 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC18.77■□□□□ 0.59
Surf1P09925 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Surf1P09925 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Surf1P09925 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Surf1P09925 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Surf1P09925 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Surf1P09925 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.76■□□□□ 0.59
Surf1P09925 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Surf1P09925 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
Surf1P09925 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.76■□□□□ 0.59
Surf1P09925 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.76■□□□□ 0.59
Surf1P09925 Gm18958-201ENSMUST00000174258 762 ntBASIC18.76■□□□□ 0.59
Surf1P09925 Gm7370-201ENSMUST00000219471 767 ntBASIC18.76■□□□□ 0.59
Surf1P09925 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Surf1P09925 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Surf1P09925 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Surf1P09925 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Surf1P09925 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Surf1P09925 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Surf1P09925 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Surf1P09925 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Surf1P09925 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Surf1P09925 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Surf1P09925 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Surf1P09925 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Surf1P09925 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
Surf1P09925 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.75■□□□□ 0.59
Surf1P09925 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Surf1P09925 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.75■□□□□ 0.59
Surf1P09925 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Surf1P09925 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Surf1P09925 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Surf1P09925 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.75■□□□□ 0.59
Surf1P09925 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Surf1P09925 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.75■□□□□ 0.59
Surf1P09925 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Surf1P09925 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Surf1P09925 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
Surf1P09925 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.75■□□□□ 0.59
Surf1P09925 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Surf1P09925 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Surf1P09925 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Surf1P09925 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.75■□□□□ 0.59
Surf1P09925 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Surf1P09925 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.74■□□□□ 0.59
Surf1P09925 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Surf1P09925 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Surf1P09925 Gm9867-201ENSMUST00000192212 2647 ntBASIC18.74■□□□□ 0.59
Surf1P09925 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Surf1P09925 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Surf1P09925 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Surf1P09925 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Surf1P09925 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.74■□□□□ 0.59
Surf1P09925 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Surf1P09925 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Surf1P09925 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Surf1P09925 Gm7977-201ENSMUST00000193787 748 ntBASIC18.74■□□□□ 0.59
Surf1P09925 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.74■□□□□ 0.59
Surf1P09925 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Surf1P09925 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Surf1P09925 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Surf1P09925 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Surf1P09925 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Surf1P09925 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Surf1P09925 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Surf1P09925 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Surf1P09925 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Surf1P09925 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Surf1P09925 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Surf1P09925 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Surf1P09925 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Surf1P09925 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Surf1P09925 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Surf1P09925 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Surf1P09925 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Surf1P09925 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.73■□□□□ 0.59
Surf1P09925 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Surf1P09925 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms