Protein–RNA interactions for Protein: P09632

Hoxb8, Homeobox protein Hox-B8, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb8P09632 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxb8P09632 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxb8P09632 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxb8P09632 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Hoxb8P09632 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxb8P09632 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Hoxb8P09632 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Hoxb8P09632 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Hoxb8P09632 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxb8P09632 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxb8P09632 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxb8P09632 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxb8P09632 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Hoxb8P09632 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxb8P09632 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Hoxb8P09632 Gm15794-201ENSMUST00000120182 631 ntBASIC17.7■□□□□ 0.42
Hoxb8P09632 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.7■□□□□ 0.42
Hoxb8P09632 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.7■□□□□ 0.42
Hoxb8P09632 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.7■□□□□ 0.42
Hoxb8P09632 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxb8P09632 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxb8P09632 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxb8P09632 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Hoxb8P09632 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Hoxb8P09632 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxb8P09632 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Hoxb8P09632 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Hoxb8P09632 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxb8P09632 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Hoxb8P09632 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.69■□□□□ 0.42
Hoxb8P09632 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxb8P09632 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxb8P09632 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Hoxb8P09632 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Hoxb8P09632 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Hoxb8P09632 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Hoxb8P09632 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxb8P09632 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxb8P09632 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.69■□□□□ 0.42
Hoxb8P09632 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxb8P09632 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxb8P09632 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Hoxb8P09632 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxb8P09632 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxb8P09632 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.68■□□□□ 0.42
Hoxb8P09632 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.68■□□□□ 0.42
Hoxb8P09632 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxb8P09632 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxb8P09632 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxb8P09632 Gm43347-201ENSMUST00000200226 580 ntBASIC17.68■□□□□ 0.42
Hoxb8P09632 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxb8P09632 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxb8P09632 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxb8P09632 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.68■□□□□ 0.42
Hoxb8P09632 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxb8P09632 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.68■□□□□ 0.42
Hoxb8P09632 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxb8P09632 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxb8P09632 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Hoxb8P09632 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.67■□□□□ 0.42
Hoxb8P09632 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxb8P09632 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxb8P09632 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxb8P09632 Gm13884-201ENSMUST00000118103 829 ntBASIC17.67■□□□□ 0.42
Hoxb8P09632 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.67■□□□□ 0.42
Hoxb8P09632 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.67■□□□□ 0.42
Hoxb8P09632 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Hoxb8P09632 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxb8P09632 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxb8P09632 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxb8P09632 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxb8P09632 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxb8P09632 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxb8P09632 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxb8P09632 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Hoxb8P09632 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Hoxb8P09632 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Hoxb8P09632 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.66■□□□□ 0.42
Hoxb8P09632 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Hoxb8P09632 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxb8P09632 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxb8P09632 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxb8P09632 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxb8P09632 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.66■□□□□ 0.42
Hoxb8P09632 Gm12895-201ENSMUST00000122214 226 ntBASIC17.66■□□□□ 0.42
Hoxb8P09632 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.66■□□□□ 0.42
Hoxb8P09632 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.66■□□□□ 0.42
Hoxb8P09632 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.66■□□□□ 0.42
Hoxb8P09632 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.66■□□□□ 0.42
Hoxb8P09632 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxb8P09632 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Hoxb8P09632 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxb8P09632 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxb8P09632 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxb8P09632 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxb8P09632 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxb8P09632 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
Hoxb8P09632 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxb8P09632 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxb8P09632 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms