Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Hoxc8P09025 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxc8P09025 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxc8P09025 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxc8P09025 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxc8P09025 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxc8P09025 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxc8P09025 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxc8P09025 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxc8P09025 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Hoxc8P09025 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxc8P09025 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxc8P09025 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.7■□□□□ 0.42
Hoxc8P09025 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.7■□□□□ 0.42
Hoxc8P09025 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxc8P09025 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Hoxc8P09025 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.7■□□□□ 0.42
Hoxc8P09025 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxc8P09025 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Hoxc8P09025 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxc8P09025 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxc8P09025 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxc8P09025 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxc8P09025 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.7■□□□□ 0.42
Hoxc8P09025 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxc8P09025 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxc8P09025 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxc8P09025 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxc8P09025 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxc8P09025 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxc8P09025 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.69■□□□□ 0.42
Hoxc8P09025 Gm11780-201ENSMUST00000136880 516 ntBASIC17.69■□□□□ 0.42
Hoxc8P09025 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.69■□□□□ 0.42
Hoxc8P09025 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.69■□□□□ 0.42
Hoxc8P09025 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxc8P09025 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxc8P09025 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxc8P09025 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxc8P09025 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.69■□□□□ 0.42
Hoxc8P09025 Gm37935-201ENSMUST00000192012 982 ntBASIC17.69■□□□□ 0.42
Hoxc8P09025 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.69■□□□□ 0.42
Hoxc8P09025 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxc8P09025 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxc8P09025 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxc8P09025 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Hoxc8P09025 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxc8P09025 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxc8P09025 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxc8P09025 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxc8P09025 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxc8P09025 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxc8P09025 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Hoxc8P09025 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxc8P09025 Gm4459-201ENSMUST00000118750 468 ntBASIC17.68■□□□□ 0.42
Hoxc8P09025 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.68■□□□□ 0.42
Hoxc8P09025 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxc8P09025 Gm25406-201ENSMUST00000157599 105 ntBASIC17.68■□□□□ 0.42
Hoxc8P09025 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxc8P09025 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxc8P09025 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.68■□□□□ 0.42
Hoxc8P09025 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.68■□□□□ 0.42
Hoxc8P09025 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.68■□□□□ 0.42
Hoxc8P09025 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.68■□□□□ 0.42
Hoxc8P09025 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxc8P09025 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxc8P09025 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Hoxc8P09025 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Hoxc8P09025 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Hoxc8P09025 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxc8P09025 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxc8P09025 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Hoxc8P09025 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxc8P09025 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxc8P09025 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxc8P09025 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.67■□□□□ 0.42
Hoxc8P09025 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxc8P09025 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Hoxc8P09025 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Hoxc8P09025 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxc8P09025 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxc8P09025 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxc8P09025 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.67■□□□□ 0.42
Hoxc8P09025 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxc8P09025 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Hoxc8P09025 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxc8P09025 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxc8P09025 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxc8P09025 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.67■□□□□ 0.42
Hoxc8P09025 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxc8P09025 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxc8P09025 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxc8P09025 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.66■□□□□ 0.42
Hoxc8P09025 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxc8P09025 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxc8P09025 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Hoxc8P09025 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxc8P09025 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxc8P09025 Gm8097-201ENSMUST00000117903 829 ntBASIC17.66■□□□□ 0.42
Hoxc8P09025 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.66■□□□□ 0.42
Hoxc8P09025 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms