Protein–RNA interactions for Protein: P04756

Chrna1, Acetylcholine receptor subunit alpha, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna1P04756 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chrna1P04756 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chrna1P04756 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.83■□□□□ 0.45
Chrna1P04756 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Chrna1P04756 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Chrna1P04756 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.83■□□□□ 0.44
Chrna1P04756 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chrna1P04756 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Chrna1P04756 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Chrna1P04756 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chrna1P04756 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chrna1P04756 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chrna1P04756 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chrna1P04756 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.83■□□□□ 0.44
Chrna1P04756 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.82■□□□□ 0.44
Chrna1P04756 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chrna1P04756 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Chrna1P04756 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chrna1P04756 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chrna1P04756 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chrna1P04756 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.82■□□□□ 0.44
Chrna1P04756 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chrna1P04756 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
Chrna1P04756 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.82■□□□□ 0.44
Chrna1P04756 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chrna1P04756 Gm43347-201ENSMUST00000200226 580 ntBASIC17.82■□□□□ 0.44
Chrna1P04756 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chrna1P04756 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chrna1P04756 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.82■□□□□ 0.44
Chrna1P04756 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chrna1P04756 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chrna1P04756 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chrna1P04756 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Chrna1P04756 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Chrna1P04756 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Chrna1P04756 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Chrna1P04756 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chrna1P04756 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.81■□□□□ 0.44
Chrna1P04756 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chrna1P04756 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chrna1P04756 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chrna1P04756 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chrna1P04756 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.81■□□□□ 0.44
Chrna1P04756 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chrna1P04756 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chrna1P04756 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chrna1P04756 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chrna1P04756 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chrna1P04756 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chrna1P04756 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chrna1P04756 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chrna1P04756 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chrna1P04756 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chrna1P04756 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chrna1P04756 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Chrna1P04756 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chrna1P04756 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Chrna1P04756 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chrna1P04756 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chrna1P04756 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Chrna1P04756 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.8■□□□□ 0.44
Chrna1P04756 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chrna1P04756 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chrna1P04756 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.8■□□□□ 0.44
Chrna1P04756 Rprl3-201ENSMUST00000157400 290 ntBASIC17.8■□□□□ 0.44
Chrna1P04756 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Chrna1P04756 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chrna1P04756 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Chrna1P04756 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chrna1P04756 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Chrna1P04756 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chrna1P04756 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chrna1P04756 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.79■□□□□ 0.44
Chrna1P04756 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chrna1P04756 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chrna1P04756 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chrna1P04756 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chrna1P04756 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chrna1P04756 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
Chrna1P04756 Gm27867-201ENSMUST00000184778 125 ntBASIC17.79■□□□□ 0.44
Chrna1P04756 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Chrna1P04756 Gm5864-201ENSMUST00000202263 970 ntBASIC17.79■□□□□ 0.44
Chrna1P04756 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chrna1P04756 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chrna1P04756 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chrna1P04756 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chrna1P04756 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chrna1P04756 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.78■□□□□ 0.44
Chrna1P04756 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chrna1P04756 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chrna1P04756 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.78■□□□□ 0.44
Chrna1P04756 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.78■□□□□ 0.44
Chrna1P04756 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.78■□□□□ 0.44
Chrna1P04756 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chrna1P04756 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Chrna1P04756 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chrna1P04756 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chrna1P04756 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chrna1P04756 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.77■□□□□ 0.44
Chrna1P04756 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms