Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm37935-201ENSMUST00000192012 982 ntBASIC20.39■□□□□ 0.86
Col4a1P02463 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Col4a1P02463 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC20.39■□□□□ 0.86
Col4a1P02463 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Col4a1P02463 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Col4a1P02463 Gm6858-201ENSMUST00000208582 1468 ntBASIC20.39■□□□□ 0.85
Col4a1P02463 Gm11841-201ENSMUST00000117060 1963 ntBASIC20.39■□□□□ 0.85
Col4a1P02463 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Col4a1P02463 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Col4a1P02463 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC20.38■□□□□ 0.85
Col4a1P02463 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC20.38■□□□□ 0.85
Col4a1P02463 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC20.38■□□□□ 0.85
Col4a1P02463 AC114585.2-202ENSMUST00000228094 426 ntBASIC20.38■□□□□ 0.85
Col4a1P02463 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col4a1P02463 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col4a1P02463 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Col4a1P02463 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col4a1P02463 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col4a1P02463 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col4a1P02463 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col4a1P02463 Gm13036-201ENSMUST00000117799 748 ntBASIC20.38■□□□□ 0.85
Col4a1P02463 Gm12497-201ENSMUST00000138778 237 ntBASIC20.38■□□□□ 0.85
Col4a1P02463 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC20.38■□□□□ 0.85
Col4a1P02463 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Col4a1P02463 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col4a1P02463 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col4a1P02463 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Col4a1P02463 Gm6550-201ENSMUST00000187574 993 ntBASIC20.38■□□□□ 0.85
Col4a1P02463 Psmb5-202ENSMUST00000227257 622 ntBASIC20.38■□□□□ 0.85
Col4a1P02463 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Col4a1P02463 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col4a1P02463 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col4a1P02463 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Col4a1P02463 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col4a1P02463 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Col4a1P02463 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Col4a1P02463 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col4a1P02463 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC20.37■□□□□ 0.85
Col4a1P02463 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC20.37■□□□□ 0.85
Col4a1P02463 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col4a1P02463 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC20.37■□□□□ 0.85
Col4a1P02463 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC20.37■□□□□ 0.85
Col4a1P02463 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col4a1P02463 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC20.37■□□□□ 0.85
Col4a1P02463 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col4a1P02463 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col4a1P02463 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col4a1P02463 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Col4a1P02463 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col4a1P02463 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col4a1P02463 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC20.36■□□□□ 0.85
Col4a1P02463 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
Col4a1P02463 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC20.36■□□□□ 0.85
Col4a1P02463 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
Col4a1P02463 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col4a1P02463 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col4a1P02463 Gm15590-201ENSMUST00000078419 552 ntBASIC20.36■□□□□ 0.85
Col4a1P02463 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col4a1P02463 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Col4a1P02463 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC20.36■□□□□ 0.85
Col4a1P02463 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Col4a1P02463 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC20.36■□□□□ 0.85
Col4a1P02463 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Col4a1P02463 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC20.35■□□□□ 0.85
Col4a1P02463 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col4a1P02463 Gm27628-201ENSMUST00000184911 107 ntBASIC20.35■□□□□ 0.85
Col4a1P02463 Gm6089-201ENSMUST00000197666 938 ntBASIC20.35■□□□□ 0.85
Col4a1P02463 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col4a1P02463 AC159093.1-201ENSMUST00000227779 380 ntBASIC20.35■□□□□ 0.85
Col4a1P02463 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col4a1P02463 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col4a1P02463 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col4a1P02463 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col4a1P02463 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col4a1P02463 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
Col4a1P02463 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col4a1P02463 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Col4a1P02463 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Col4a1P02463 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC20.35■□□□□ 0.85
Col4a1P02463 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC20.35■□□□□ 0.85
Col4a1P02463 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC20.35■□□□□ 0.85
Col4a1P02463 Gm43073-201ENSMUST00000198200 1189 ntBASIC20.35■□□□□ 0.85
Col4a1P02463 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Col4a1P02463 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col4a1P02463 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col4a1P02463 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Col4a1P02463 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col4a1P02463 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col4a1P02463 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col4a1P02463 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Col4a1P02463 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col4a1P02463 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Col4a1P02463 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Col4a1P02463 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Col4a1P02463 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Col4a1P02463 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Col4a1P02463 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col4a1P02463 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col4a1P02463 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col4a1P02463 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms