Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hbb-b1P02088 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hbb-b1P02088 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Hbb-b1P02088 Gm7417-201ENSMUST00000192950 473 ntBASIC11.8□□□□□ -0.52
Hbb-b1P02088 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hbb-b1P02088 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hbb-b1P02088 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hbb-b1P02088 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Hbb-b1P02088 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC11.8□□□□□ -0.52
Hbb-b1P02088 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hbb-b1P02088 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hbb-b1P02088 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Hbb-b1P02088 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Hbb-b1P02088 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hbb-b1P02088 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hbb-b1P02088 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hbb-b1P02088 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hbb-b1P02088 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hbb-b1P02088 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hbb-b1P02088 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hbb-b1P02088 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hbb-b1P02088 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hbb-b1P02088 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Hbb-b1P02088 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-b1P02088 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-b1P02088 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Hbb-b1P02088 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-b1P02088 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC11.79□□□□□ -0.52
Hbb-b1P02088 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Hbb-b1P02088 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC11.79□□□□□ -0.52
Hbb-b1P02088 AC115863.1-201ENSMUST00000214815 1813 ntBASIC11.79□□□□□ -0.52
Hbb-b1P02088 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-b1P02088 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-b1P02088 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-b1P02088 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-b1P02088 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Hbb-b1P02088 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Hbb-b1P02088 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-b1P02088 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-b1P02088 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC11.79□□□□□ -0.52
Hbb-b1P02088 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-b1P02088 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-b1P02088 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC11.79□□□□□ -0.52
Hbb-b1P02088 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-b1P02088 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-b1P02088 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-b1P02088 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-b1P02088 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-b1P02088 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-b1P02088 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-b1P02088 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-b1P02088 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-b1P02088 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Hbb-b1P02088 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-b1P02088 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-b1P02088 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-b1P02088 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-b1P02088 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-b1P02088 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hbb-b1P02088 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC11.78□□□□□ -0.52
Hbb-b1P02088 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hbb-b1P02088 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hbb-b1P02088 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hbb-b1P02088 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hbb-b1P02088 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hbb-b1P02088 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC11.78□□□□□ -0.52
Hbb-b1P02088 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hbb-b1P02088 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hbb-b1P02088 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hbb-b1P02088 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Hbb-b1P02088 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Hbb-b1P02088 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hbb-b1P02088 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hbb-b1P02088 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hbb-b1P02088 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hbb-b1P02088 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Hbb-b1P02088 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Hbb-b1P02088 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hbb-b1P02088 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hbb-b1P02088 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hbb-b1P02088 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hbb-b1P02088 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Hbb-b1P02088 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hbb-b1P02088 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Hbb-b1P02088 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hbb-b1P02088 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hbb-b1P02088 Ccdc166-201ENSMUST00000182172 2584 ntBASIC11.77□□□□□ -0.52
Hbb-b1P02088 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Hbb-b1P02088 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Hbb-b1P02088 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hbb-b1P02088 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hbb-b1P02088 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hbb-b1P02088 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hbb-b1P02088 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hbb-b1P02088 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hbb-b1P02088 Gm37912-201ENSMUST00000191895 3076 ntBASIC11.77□□□□□ -0.53
Hbb-b1P02088 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hbb-b1P02088 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hbb-b1P02088 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hbb-b1P02088 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms