Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Vti1aO89116 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vti1aO89116 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vti1aO89116 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Vti1aO89116 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vti1aO89116 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vti1aO89116 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vti1aO89116 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Vti1aO89116 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Vti1aO89116 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Vti1aO89116 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vti1aO89116 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vti1aO89116 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Vti1aO89116 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Vti1aO89116 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.92■□□□□ 0.46
Vti1aO89116 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.92■□□□□ 0.46
Vti1aO89116 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Vti1aO89116 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vti1aO89116 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vti1aO89116 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vti1aO89116 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vti1aO89116 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vti1aO89116 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vti1aO89116 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Vti1aO89116 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vti1aO89116 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.91■□□□□ 0.46
Vti1aO89116 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vti1aO89116 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Vti1aO89116 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Vti1aO89116 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.91■□□□□ 0.46
Vti1aO89116 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vti1aO89116 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vti1aO89116 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vti1aO89116 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vti1aO89116 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vti1aO89116 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vti1aO89116 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Vti1aO89116 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vti1aO89116 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vti1aO89116 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Vti1aO89116 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Vti1aO89116 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Vti1aO89116 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vti1aO89116 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vti1aO89116 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vti1aO89116 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Vti1aO89116 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.9■□□□□ 0.46
Vti1aO89116 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vti1aO89116 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Vti1aO89116 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Vti1aO89116 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Vti1aO89116 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Vti1aO89116 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.9■□□□□ 0.46
Vti1aO89116 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.9■□□□□ 0.46
Vti1aO89116 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Vti1aO89116 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.9■□□□□ 0.46
Vti1aO89116 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vti1aO89116 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Vti1aO89116 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vti1aO89116 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vti1aO89116 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vti1aO89116 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vti1aO89116 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Vti1aO89116 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.9■□□□□ 0.46
Vti1aO89116 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vti1aO89116 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Vti1aO89116 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vti1aO89116 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vti1aO89116 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Vti1aO89116 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Vti1aO89116 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Vti1aO89116 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Vti1aO89116 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Vti1aO89116 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vti1aO89116 Gm24589-201ENSMUST00000116692 94 ntBASIC17.89■□□□□ 0.45
Vti1aO89116 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Vti1aO89116 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.89■□□□□ 0.45
Vti1aO89116 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Vti1aO89116 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Vti1aO89116 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.89■□□□□ 0.45
Vti1aO89116 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Vti1aO89116 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vti1aO89116 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.89■□□□□ 0.45
Vti1aO89116 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Vti1aO89116 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Vti1aO89116 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Vti1aO89116 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vti1aO89116 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vti1aO89116 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vti1aO89116 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vti1aO89116 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vti1aO89116 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vti1aO89116 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Vti1aO89116 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Vti1aO89116 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vti1aO89116 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vti1aO89116 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vti1aO89116 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vti1aO89116 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vti1aO89116 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms