Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Tgfbr3O88393 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.78■□□□□ 0.12
Tgfbr3O88393 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tgfbr3O88393 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tgfbr3O88393 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.78■□□□□ 0.12
Tgfbr3O88393 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tgfbr3O88393 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tgfbr3O88393 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tgfbr3O88393 Gm1401-201ENSMUST00000122048 772 ntBASIC15.78■□□□□ 0.12
Tgfbr3O88393 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.78■□□□□ 0.12
Tgfbr3O88393 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Tgfbr3O88393 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.78■□□□□ 0.12
Tgfbr3O88393 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.78■□□□□ 0.12
Tgfbr3O88393 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tgfbr3O88393 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tgfbr3O88393 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tgfbr3O88393 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tgfbr3O88393 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tgfbr3O88393 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.78■□□□□ 0.12
Tgfbr3O88393 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Tgfbr3O88393 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tgfbr3O88393 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tgfbr3O88393 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Tgfbr3O88393 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tgfbr3O88393 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tgfbr3O88393 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tgfbr3O88393 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.77■□□□□ 0.12
Tgfbr3O88393 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tgfbr3O88393 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tgfbr3O88393 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tgfbr3O88393 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tgfbr3O88393 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tgfbr3O88393 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tgfbr3O88393 Gm37935-201ENSMUST00000192012 982 ntBASIC15.77■□□□□ 0.12
Tgfbr3O88393 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.77■□□□□ 0.12
Tgfbr3O88393 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.77■□□□□ 0.12
Tgfbr3O88393 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Tgfbr3O88393 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tgfbr3O88393 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.77■□□□□ 0.12
Tgfbr3O88393 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tgfbr3O88393 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.77■□□□□ 0.12
Tgfbr3O88393 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Tgfbr3O88393 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.77■□□□□ 0.11
Tgfbr3O88393 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Tgfbr3O88393 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.77■□□□□ 0.11
Tgfbr3O88393 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
Tgfbr3O88393 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tgfbr3O88393 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Tgfbr3O88393 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.76■□□□□ 0.11
Tgfbr3O88393 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tgfbr3O88393 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tgfbr3O88393 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tgfbr3O88393 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tgfbr3O88393 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tgfbr3O88393 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tgfbr3O88393 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.76■□□□□ 0.11
Tgfbr3O88393 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Tgfbr3O88393 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.76■□□□□ 0.11
Tgfbr3O88393 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.76■□□□□ 0.11
Tgfbr3O88393 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tgfbr3O88393 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tgfbr3O88393 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Tgfbr3O88393 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tgfbr3O88393 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Tgfbr3O88393 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tgfbr3O88393 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.76■□□□□ 0.11
Tgfbr3O88393 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tgfbr3O88393 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Tgfbr3O88393 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Tgfbr3O88393 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Tgfbr3O88393 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tgfbr3O88393 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tgfbr3O88393 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tgfbr3O88393 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Tgfbr3O88393 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Tgfbr3O88393 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tgfbr3O88393 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Tgfbr3O88393 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.75■□□□□ 0.11
Tgfbr3O88393 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Tgfbr3O88393 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tgfbr3O88393 Gm10060-201ENSMUST00000212002 111 ntBASIC15.75■□□□□ 0.11
Tgfbr3O88393 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.75■□□□□ 0.11
Tgfbr3O88393 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tgfbr3O88393 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tgfbr3O88393 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tgfbr3O88393 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Tgfbr3O88393 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Tgfbr3O88393 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.75■□□□□ 0.11
Tgfbr3O88393 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Tgfbr3O88393 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Tgfbr3O88393 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tgfbr3O88393 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tgfbr3O88393 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.74■□□□□ 0.11
Tgfbr3O88393 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Tgfbr3O88393 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tgfbr3O88393 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tgfbr3O88393 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
Tgfbr3O88393 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.74■□□□□ 0.11
Tgfbr3O88393 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.74■□□□□ 0.11
Tgfbr3O88393 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms