Protein–RNA interactions for Protein: O88351

Ikbkb, Inhibitor of nuclear factor kappa-B kinase subunit beta, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkbO88351 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.4■□□□□ 0.54
IkbkbO88351 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
IkbkbO88351 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.4■□□□□ 0.54
IkbkbO88351 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
IkbkbO88351 Gm7213-201ENSMUST00000215977 950 ntBASIC18.4■□□□□ 0.54
IkbkbO88351 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.4■□□□□ 0.54
IkbkbO88351 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
IkbkbO88351 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
IkbkbO88351 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IkbkbO88351 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
IkbkbO88351 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
IkbkbO88351 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
IkbkbO88351 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
IkbkbO88351 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IkbkbO88351 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IkbkbO88351 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IkbkbO88351 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IkbkbO88351 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
IkbkbO88351 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
IkbkbO88351 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
IkbkbO88351 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
IkbkbO88351 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IkbkbO88351 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.39■□□□□ 0.53
IkbkbO88351 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
IkbkbO88351 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
IkbkbO88351 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
IkbkbO88351 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
IkbkbO88351 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
IkbkbO88351 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
IkbkbO88351 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
IkbkbO88351 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
IkbkbO88351 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
IkbkbO88351 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
IkbkbO88351 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
IkbkbO88351 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
IkbkbO88351 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
IkbkbO88351 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
IkbkbO88351 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
IkbkbO88351 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
IkbkbO88351 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
IkbkbO88351 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IkbkbO88351 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
IkbkbO88351 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IkbkbO88351 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
IkbkbO88351 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
IkbkbO88351 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.38■□□□□ 0.53
IkbkbO88351 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.38■□□□□ 0.53
IkbkbO88351 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
IkbkbO88351 Mir1668-201ENSMUST00000184114 107 ntBASIC18.38■□□□□ 0.53
IkbkbO88351 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IkbkbO88351 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
IkbkbO88351 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IkbkbO88351 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
IkbkbO88351 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.38■□□□□ 0.53
IkbkbO88351 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.38■□□□□ 0.53
IkbkbO88351 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
IkbkbO88351 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IkbkbO88351 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IkbkbO88351 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.37■□□□□ 0.53
IkbkbO88351 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.37■□□□□ 0.53
IkbkbO88351 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
IkbkbO88351 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.37■□□□□ 0.53
IkbkbO88351 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IkbkbO88351 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IkbkbO88351 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IkbkbO88351 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
IkbkbO88351 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IkbkbO88351 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.37■□□□□ 0.53
IkbkbO88351 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.37■□□□□ 0.53
IkbkbO88351 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IkbkbO88351 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IkbkbO88351 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IkbkbO88351 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
IkbkbO88351 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IkbkbO88351 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
IkbkbO88351 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
IkbkbO88351 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
IkbkbO88351 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
IkbkbO88351 AA414768-201ENSMUST00000121924 1257 ntBASIC18.36■□□□□ 0.53
IkbkbO88351 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
IkbkbO88351 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
IkbkbO88351 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
IkbkbO88351 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
IkbkbO88351 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
IkbkbO88351 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
IkbkbO88351 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.36■□□□□ 0.53
IkbkbO88351 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.36■□□□□ 0.53
IkbkbO88351 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.36■□□□□ 0.53
IkbkbO88351 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
IkbkbO88351 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
IkbkbO88351 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
IkbkbO88351 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
IkbkbO88351 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
IkbkbO88351 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
IkbkbO88351 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.36■□□□□ 0.53
IkbkbO88351 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
IkbkbO88351 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
IkbkbO88351 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
IkbkbO88351 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
IkbkbO88351 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms