Protein–RNA interactions for Protein: O88255

Gm10509, Mszf57 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10509O88255 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm10509O88255 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm10509O88255 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm10509O88255 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm10509O88255 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm10509O88255 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm10509O88255 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm10509O88255 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm10509O88255 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC11.87□□□□□ -0.51
Gm10509O88255 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm10509O88255 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Gm10509O88255 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm10509O88255 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm10509O88255 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm10509O88255 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm10509O88255 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm10509O88255 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Gm10509O88255 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC11.87□□□□□ -0.51
Gm10509O88255 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Gm10509O88255 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm10509O88255 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Gm10509O88255 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC11.87□□□□□ -0.51
Gm10509O88255 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC11.87□□□□□ -0.51
Gm10509O88255 Gm8520-201ENSMUST00000186517 868 ntBASIC11.87□□□□□ -0.51
Gm10509O88255 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC11.87□□□□□ -0.51
Gm10509O88255 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm10509O88255 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Gm10509O88255 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm10509O88255 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm10509O88255 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC11.87□□□□□ -0.51
Gm10509O88255 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm10509O88255 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm10509O88255 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm10509O88255 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Gm10509O88255 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm10509O88255 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm10509O88255 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Gm10509O88255 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm10509O88255 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm10509O88255 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm10509O88255 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Gm10509O88255 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Gm10509O88255 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm10509O88255 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Gm10509O88255 Gm715-201ENSMUST00000117865 831 ntBASIC11.86□□□□□ -0.51
Gm10509O88255 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC11.86□□□□□ -0.51
Gm10509O88255 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm10509O88255 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC11.86□□□□□ -0.51
Gm10509O88255 Gm3375-201ENSMUST00000203929 796 ntBASIC11.86□□□□□ -0.51
Gm10509O88255 Otx2os1-204ENSMUST00000227221 751 ntBASIC11.86□□□□□ -0.51
Gm10509O88255 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm10509O88255 Gm6190-201ENSMUST00000220683 1374 ntBASIC11.86□□□□□ -0.51
Gm10509O88255 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm10509O88255 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC11.86□□□□□ -0.51
Gm10509O88255 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Gm10509O88255 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Gm10509O88255 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC11.86□□□□□ -0.51
Gm10509O88255 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm10509O88255 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm10509O88255 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm10509O88255 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Gm10509O88255 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm10509O88255 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm10509O88255 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm10509O88255 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm10509O88255 AC115863.1-201ENSMUST00000214815 1813 ntBASIC11.86□□□□□ -0.51
Gm10509O88255 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm10509O88255 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm10509O88255 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm10509O88255 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm10509O88255 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm10509O88255 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC11.86□□□□□ -0.51
Gm10509O88255 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm10509O88255 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Gm10509O88255 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm10509O88255 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Gm10509O88255 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm10509O88255 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm10509O88255 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm10509O88255 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm10509O88255 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm10509O88255 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm10509O88255 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm10509O88255 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Gm10509O88255 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm10509O88255 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Gm10509O88255 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC11.85□□□□□ -0.51
Gm10509O88255 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Gm10509O88255 Gm29257-201ENSMUST00000186115 639 ntBASIC11.85□□□□□ -0.51
Gm10509O88255 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Gm10509O88255 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm10509O88255 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm10509O88255 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm10509O88255 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm10509O88255 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm10509O88255 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm10509O88255 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm10509O88255 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm10509O88255 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm10509O88255 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms