Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC21.53■■□□□ 1.04
Ubr1O70481 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC21.53■■□□□ 1.04
Ubr1O70481 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC21.53■■□□□ 1.04
Ubr1O70481 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC21.53■■□□□ 1.04
Ubr1O70481 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC21.53■■□□□ 1.04
Ubr1O70481 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Ubr1O70481 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.53■■□□□ 1.04
Ubr1O70481 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ubr1O70481 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ubr1O70481 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ubr1O70481 Gm14140-201ENSMUST00000119999 995 ntBASIC21.53■■□□□ 1.04
Ubr1O70481 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC21.53■■□□□ 1.04
Ubr1O70481 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
Ubr1O70481 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC21.53■■□□□ 1.04
Ubr1O70481 Gm5837-201ENSMUST00000191844 1369 ntBASIC21.53■■□□□ 1.04
Ubr1O70481 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ubr1O70481 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ubr1O70481 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ubr1O70481 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ubr1O70481 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Ubr1O70481 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Ubr1O70481 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ubr1O70481 AV026068-213ENSMUST00000223675 1171 ntBASIC21.52■■□□□ 1.04
Ubr1O70481 AC159093.1-201ENSMUST00000227779 380 ntBASIC21.52■■□□□ 1.04
Ubr1O70481 AC117588.1-201ENSMUST00000228510 999 ntBASIC21.52■■□□□ 1.04
Ubr1O70481 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ubr1O70481 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ubr1O70481 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC21.52■■□□□ 1.03
Ubr1O70481 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Ubr1O70481 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC21.51■■□□□ 1.03
Ubr1O70481 Gm11594-201ENSMUST00000122313 162 ntBASIC21.51■■□□□ 1.03
Ubr1O70481 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC21.51■■□□□ 1.03
Ubr1O70481 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC21.51■■□□□ 1.03
Ubr1O70481 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ubr1O70481 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ubr1O70481 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Ubr1O70481 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ubr1O70481 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Ubr1O70481 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ubr1O70481 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
Ubr1O70481 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ubr1O70481 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ubr1O70481 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Ubr1O70481 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ubr1O70481 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC21.51■■□□□ 1.03
Ubr1O70481 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ubr1O70481 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ubr1O70481 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ubr1O70481 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ubr1O70481 Gm43332-201ENSMUST00000202511 1044 ntBASIC21.5■■□□□ 1.03
Ubr1O70481 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Ubr1O70481 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ubr1O70481 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ubr1O70481 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC21.5■■□□□ 1.03
Ubr1O70481 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ubr1O70481 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Ubr1O70481 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ubr1O70481 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Ubr1O70481 Gm43935-201ENSMUST00000203569 1050 ntBASIC21.49■■□□□ 1.03
Ubr1O70481 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Ubr1O70481 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ubr1O70481 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ubr1O70481 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ubr1O70481 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ubr1O70481 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ubr1O70481 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC21.49■■□□□ 1.03
Ubr1O70481 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ubr1O70481 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ubr1O70481 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ubr1O70481 Gm5682-201ENSMUST00000173402 505 ntBASIC21.48■■□□□ 1.03
Ubr1O70481 Gm27628-201ENSMUST00000184911 107 ntBASIC21.48■■□□□ 1.03
Ubr1O70481 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ubr1O70481 Gm10175-201ENSMUST00000086013 645 ntBASIC21.48■■□□□ 1.03
Ubr1O70481 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ubr1O70481 AC132265.1-201ENSMUST00000219233 1665 ntBASIC21.48■■□□□ 1.03
Ubr1O70481 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ubr1O70481 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ubr1O70481 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ubr1O70481 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Ubr1O70481 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ubr1O70481 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ubr1O70481 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ubr1O70481 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ubr1O70481 Gm8784-201ENSMUST00000222096 1435 ntBASIC21.47■■□□□ 1.03
Ubr1O70481 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ubr1O70481 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC21.47■■□□□ 1.03
Ubr1O70481 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC21.47■■□□□ 1.03
Ubr1O70481 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC21.47■■□□□ 1.03
Ubr1O70481 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC21.47■■□□□ 1.03
Ubr1O70481 Gm8000-201ENSMUST00000188378 592 ntBASIC21.47■■□□□ 1.03
Ubr1O70481 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ubr1O70481 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ubr1O70481 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC21.47■■□□□ 1.03
Ubr1O70481 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ubr1O70481 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Ubr1O70481 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Ubr1O70481 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ubr1O70481 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC21.46■■□□□ 1.03
Ubr1O70481 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ubr1O70481 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC21.46■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms