Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.76■□□□□ 0.11
Rdh5O55240 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rdh5O55240 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rdh5O55240 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rdh5O55240 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rdh5O55240 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.76■□□□□ 0.11
Rdh5O55240 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rdh5O55240 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rdh5O55240 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rdh5O55240 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.75■□□□□ 0.11
Rdh5O55240 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rdh5O55240 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.75■□□□□ 0.11
Rdh5O55240 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.75■□□□□ 0.11
Rdh5O55240 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rdh5O55240 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rdh5O55240 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rdh5O55240 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rdh5O55240 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rdh5O55240 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rdh5O55240 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rdh5O55240 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rdh5O55240 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rdh5O55240 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rdh5O55240 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Rdh5O55240 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Rdh5O55240 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rdh5O55240 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rdh5O55240 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rdh5O55240 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rdh5O55240 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rdh5O55240 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rdh5O55240 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Rdh5O55240 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.74■□□□□ 0.11
Rdh5O55240 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.74■□□□□ 0.11
Rdh5O55240 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rdh5O55240 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rdh5O55240 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rdh5O55240 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rdh5O55240 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Rdh5O55240 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rdh5O55240 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rdh5O55240 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.74■□□□□ 0.11
Rdh5O55240 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rdh5O55240 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rdh5O55240 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rdh5O55240 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rdh5O55240 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rdh5O55240 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rdh5O55240 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rdh5O55240 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rdh5O55240 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.73■□□□□ 0.11
Rdh5O55240 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Rdh5O55240 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Rdh5O55240 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rdh5O55240 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rdh5O55240 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rdh5O55240 Gm13474-201ENSMUST00000122466 815 ntBASIC15.73■□□□□ 0.11
Rdh5O55240 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rdh5O55240 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.73■□□□□ 0.11
Rdh5O55240 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Rdh5O55240 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rdh5O55240 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rdh5O55240 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rdh5O55240 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rdh5O55240 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rdh5O55240 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Rdh5O55240 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rdh5O55240 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.73■□□□□ 0.11
Rdh5O55240 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rdh5O55240 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rdh5O55240 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rdh5O55240 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rdh5O55240 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.73■□□□□ 0.11
Rdh5O55240 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Rdh5O55240 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.72■□□□□ 0.11
Rdh5O55240 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
Rdh5O55240 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rdh5O55240 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Rdh5O55240 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rdh5O55240 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rdh5O55240 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rdh5O55240 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rdh5O55240 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Rdh5O55240 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rdh5O55240 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.72■□□□□ 0.11
Rdh5O55240 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.72■□□□□ 0.11
Rdh5O55240 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.72■□□□□ 0.11
Rdh5O55240 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.72■□□□□ 0.11
Rdh5O55240 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.72■□□□□ 0.11
Rdh5O55240 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rdh5O55240 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rdh5O55240 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rdh5O55240 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rdh5O55240 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rdh5O55240 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rdh5O55240 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rdh5O55240 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rdh5O55240 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rdh5O55240 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Rdh5O55240 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms