Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Rpl35aO55142 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC12.4□□□□□ -0.42
Rpl35aO55142 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.4□□□□□ -0.42
Rpl35aO55142 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl35aO55142 Gm23634-201ENSMUST00000175071 91 ntBASIC12.4□□□□□ -0.42
Rpl35aO55142 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.4□□□□□ -0.42
Rpl35aO55142 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl35aO55142 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl35aO55142 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl35aO55142 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl35aO55142 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl35aO55142 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl35aO55142 Gm44832-201ENSMUST00000208849 2303 ntBASIC12.4□□□□□ -0.42
Rpl35aO55142 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Rpl35aO55142 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl35aO55142 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl35aO55142 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl35aO55142 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC12.4□□□□□ -0.42
Rpl35aO55142 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Rpl35aO55142 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Rpl35aO55142 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Rpl35aO55142 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rpl35aO55142 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rpl35aO55142 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rpl35aO55142 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rpl35aO55142 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl35aO55142 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl35aO55142 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl35aO55142 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl35aO55142 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl35aO55142 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl35aO55142 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC12.39□□□□□ -0.43
Rpl35aO55142 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl35aO55142 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl35aO55142 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl35aO55142 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl35aO55142 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Rpl35aO55142 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC12.39□□□□□ -0.43
Rpl35aO55142 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl35aO55142 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl35aO55142 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rpl35aO55142 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl35aO55142 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Rpl35aO55142 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl35aO55142 Gm6659-201ENSMUST00000174752 547 ntBASIC12.39□□□□□ -0.43
Rpl35aO55142 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.39□□□□□ -0.43
Rpl35aO55142 Gm27000-201ENSMUST00000182943 842 ntBASIC12.39□□□□□ -0.43
Rpl35aO55142 Gm21559-201ENSMUST00000220638 855 ntBASIC12.39□□□□□ -0.43
Rpl35aO55142 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Rpl35aO55142 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl35aO55142 Gm8587-201ENSMUST00000076538 843 ntBASIC12.39□□□□□ -0.43
Rpl35aO55142 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Rpl35aO55142 Gm10566-201ENSMUST00000086739 996 ntBASIC12.39□□□□□ -0.43
Rpl35aO55142 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rpl35aO55142 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl35aO55142 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl35aO55142 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rpl35aO55142 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl35aO55142 Gm16499-203ENSMUST00000204633 2177 ntBASIC12.39□□□□□ -0.43
Rpl35aO55142 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Rpl35aO55142 Gm43702-201ENSMUST00000198772 2546 ntBASIC12.39□□□□□ -0.43
Rpl35aO55142 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Rpl35aO55142 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl35aO55142 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rpl35aO55142 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl35aO55142 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rpl35aO55142 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl35aO55142 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl35aO55142 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.38□□□□□ -0.43
Rpl35aO55142 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl35aO55142 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl35aO55142 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl35aO55142 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl35aO55142 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl35aO55142 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl35aO55142 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl35aO55142 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl35aO55142 Haglr-201ENSMUST00000100000 2085 ntBASIC12.38□□□□□ -0.43
Rpl35aO55142 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl35aO55142 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl35aO55142 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl35aO55142 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl35aO55142 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl35aO55142 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl35aO55142 Mir1668-201ENSMUST00000184114 107 ntBASIC12.38□□□□□ -0.43
Rpl35aO55142 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl35aO55142 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl35aO55142 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl35aO55142 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl35aO55142 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.38□□□□□ -0.43
Rpl35aO55142 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl35aO55142 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl35aO55142 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl35aO55142 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl35aO55142 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl35aO55142 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl35aO55142 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl35aO55142 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Rpl35aO55142 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl35aO55142 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms