Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SncaO55042 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SncaO55042 Gm12441-201ENSMUST00000121806 588 ntBASIC13.8□□□□□ -0.2
SncaO55042 Gm24841-201ENSMUST00000158676 357 ntBASIC13.8□□□□□ -0.2
SncaO55042 Gm20049-201ENSMUST00000219950 730 ntBASIC13.8□□□□□ -0.2
SncaO55042 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SncaO55042 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SncaO55042 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SncaO55042 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SncaO55042 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
SncaO55042 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SncaO55042 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SncaO55042 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SncaO55042 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SncaO55042 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SncaO55042 Nrn1-203ENSMUST00000223611 1443 ntBASIC13.8□□□□□ -0.2
SncaO55042 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
SncaO55042 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SncaO55042 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SncaO55042 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SncaO55042 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SncaO55042 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SncaO55042 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SncaO55042 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SncaO55042 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SncaO55042 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SncaO55042 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SncaO55042 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SncaO55042 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SncaO55042 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SncaO55042 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SncaO55042 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SncaO55042 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SncaO55042 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SncaO55042 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SncaO55042 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.79□□□□□ -0.2
SncaO55042 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC13.79□□□□□ -0.2
SncaO55042 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SncaO55042 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SncaO55042 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SncaO55042 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SncaO55042 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SncaO55042 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SncaO55042 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SncaO55042 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SncaO55042 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SncaO55042 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SncaO55042 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SncaO55042 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SncaO55042 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SncaO55042 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.79□□□□□ -0.2
SncaO55042 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SncaO55042 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC13.78□□□□□ -0.2
SncaO55042 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SncaO55042 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SncaO55042 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SncaO55042 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SncaO55042 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
SncaO55042 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SncaO55042 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SncaO55042 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SncaO55042 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.78□□□□□ -0.2
SncaO55042 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SncaO55042 Gm37025-201ENSMUST00000195159 829 ntBASIC13.78□□□□□ -0.2
SncaO55042 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SncaO55042 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SncaO55042 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
SncaO55042 AC124581.1-201ENSMUST00000225416 1399 ntBASIC13.78□□□□□ -0.2
SncaO55042 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SncaO55042 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.78□□□□□ -0.2
SncaO55042 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SncaO55042 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SncaO55042 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SncaO55042 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
SncaO55042 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SncaO55042 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SncaO55042 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SncaO55042 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
SncaO55042 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SncaO55042 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SncaO55042 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SncaO55042 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SncaO55042 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SncaO55042 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SncaO55042 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.77□□□□□ -0.21
SncaO55042 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC13.77□□□□□ -0.21
SncaO55042 Gm43183-201ENSMUST00000200632 547 ntBASIC13.77□□□□□ -0.21
SncaO55042 AC107711.5-202ENSMUST00000226429 702 ntBASIC13.77□□□□□ -0.21
SncaO55042 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SncaO55042 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
SncaO55042 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SncaO55042 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SncaO55042 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SncaO55042 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SncaO55042 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SncaO55042 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SncaO55042 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.76□□□□□ -0.21
SncaO55042 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SncaO55042 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC13.76□□□□□ -0.21
SncaO55042 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms