Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cntnap1O54991 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Cntnap1O54991 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cntnap1O54991 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Cntnap1O54991 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cntnap1O54991 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC21.42■■□□□ 1.02
Cntnap1O54991 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Cntnap1O54991 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Cntnap1O54991 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Cntnap1O54991 Gm45141-201ENSMUST00000206502 1888 ntBASIC21.42■■□□□ 1.02
Cntnap1O54991 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.42■■□□□ 1.02
Cntnap1O54991 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Cntnap1O54991 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cntnap1O54991 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cntnap1O54991 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Cntnap1O54991 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cntnap1O54991 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cntnap1O54991 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cntnap1O54991 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Cntnap1O54991 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cntnap1O54991 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cntnap1O54991 Gm18889-201ENSMUST00000174284 929 ntBASIC21.41■■□□□ 1.02
Cntnap1O54991 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC21.41■■□□□ 1.02
Cntnap1O54991 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Cntnap1O54991 AC147366.1-201ENSMUST00000227671 852 ntBASIC21.41■■□□□ 1.02
Cntnap1O54991 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cntnap1O54991 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cntnap1O54991 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cntnap1O54991 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Cntnap1O54991 Fst-202ENSMUST00000223640 2612 ntBASIC21.41■■□□□ 1.02
Cntnap1O54991 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cntnap1O54991 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Cntnap1O54991 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Cntnap1O54991 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Cntnap1O54991 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Cntnap1O54991 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cntnap1O54991 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC21.4■■□□□ 1.02
Cntnap1O54991 Gm18622-201ENSMUST00000219361 595 ntBASIC21.4■■□□□ 1.02
Cntnap1O54991 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Cntnap1O54991 Gm2423-201ENSMUST00000074863 733 ntBASIC21.4■■□□□ 1.02
Cntnap1O54991 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cntnap1O54991 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC21.4■■□□□ 1.02
Cntnap1O54991 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cntnap1O54991 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Cntnap1O54991 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cntnap1O54991 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cntnap1O54991 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Cntnap1O54991 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cntnap1O54991 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cntnap1O54991 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC21.39■■□□□ 1.02
Cntnap1O54991 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC21.39■■□□□ 1.02
Cntnap1O54991 Gtpbp10-211ENSMUST00000198799 648 ntBASIC21.39■■□□□ 1.02
Cntnap1O54991 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cntnap1O54991 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cntnap1O54991 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cntnap1O54991 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Cntnap1O54991 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC21.39■■□□□ 1.01
Cntnap1O54991 AC154767.3-201ENSMUST00000225150 1342 ntBASIC21.39■■□□□ 1.01
Cntnap1O54991 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cntnap1O54991 AC125311.2-201ENSMUST00000227477 1940 ntBASIC21.39■■□□□ 1.01
Cntnap1O54991 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Cntnap1O54991 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC21.38■■□□□ 1.01
Cntnap1O54991 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Cntnap1O54991 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Cntnap1O54991 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC21.38■■□□□ 1.01
Cntnap1O54991 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cntnap1O54991 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cntnap1O54991 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cntnap1O54991 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cntnap1O54991 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cntnap1O54991 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cntnap1O54991 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cntnap1O54991 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cntnap1O54991 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cntnap1O54991 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cntnap1O54991 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.38■■□□□ 1.01
Cntnap1O54991 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Cntnap1O54991 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cntnap1O54991 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cntnap1O54991 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC21.37■■□□□ 1.01
Cntnap1O54991 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC21.37■■□□□ 1.01
Cntnap1O54991 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC21.37■■□□□ 1.01
Cntnap1O54991 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC21.37■■□□□ 1.01
Cntnap1O54991 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC21.37■■□□□ 1.01
Cntnap1O54991 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cntnap1O54991 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Cntnap1O54991 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cntnap1O54991 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cntnap1O54991 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cntnap1O54991 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cntnap1O54991 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cntnap1O54991 Gm5177-201ENSMUST00000183092 997 ntBASIC21.36■■□□□ 1.01
Cntnap1O54991 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cntnap1O54991 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cntnap1O54991 Gm15743-202ENSMUST00000182690 1901 ntBASIC21.36■■□□□ 1.01
Cntnap1O54991 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cntnap1O54991 Gm45203-201ENSMUST00000206384 1831 ntBASIC21.36■■□□□ 1.01
Cntnap1O54991 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cntnap1O54991 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cntnap1O54991 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC21.36■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms