Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DffbO54788 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
DffbO54788 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.31□□□□□ -0.12
DffbO54788 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DffbO54788 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
DffbO54788 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DffbO54788 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
DffbO54788 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
DffbO54788 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
DffbO54788 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
DffbO54788 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DffbO54788 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
DffbO54788 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DffbO54788 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
DffbO54788 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DffbO54788 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
DffbO54788 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
DffbO54788 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
DffbO54788 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
DffbO54788 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
DffbO54788 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
DffbO54788 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
DffbO54788 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.3□□□□□ -0.12
DffbO54788 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
DffbO54788 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
DffbO54788 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
DffbO54788 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
DffbO54788 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
DffbO54788 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
DffbO54788 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
DffbO54788 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
DffbO54788 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
DffbO54788 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
DffbO54788 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
DffbO54788 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC14.3□□□□□ -0.12
DffbO54788 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
DffbO54788 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
DffbO54788 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.3□□□□□ -0.12
DffbO54788 Gm43183-201ENSMUST00000200632 547 ntBASIC14.3□□□□□ -0.12
DffbO54788 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
DffbO54788 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
DffbO54788 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
DffbO54788 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
DffbO54788 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
DffbO54788 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
DffbO54788 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.3□□□□□ -0.12
DffbO54788 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.3□□□□□ -0.12
DffbO54788 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
DffbO54788 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
DffbO54788 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
DffbO54788 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DffbO54788 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DffbO54788 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
DffbO54788 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
DffbO54788 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DffbO54788 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.29□□□□□ -0.12
DffbO54788 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DffbO54788 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DffbO54788 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DffbO54788 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DffbO54788 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DffbO54788 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
DffbO54788 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.29□□□□□ -0.12
DffbO54788 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC14.29□□□□□ -0.12
DffbO54788 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.29□□□□□ -0.12
DffbO54788 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
DffbO54788 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
DffbO54788 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DffbO54788 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DffbO54788 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DffbO54788 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
DffbO54788 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
DffbO54788 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
DffbO54788 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
DffbO54788 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
DffbO54788 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
DffbO54788 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
DffbO54788 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DffbO54788 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DffbO54788 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
DffbO54788 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DffbO54788 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DffbO54788 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
DffbO54788 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14.28□□□□□ -0.12
DffbO54788 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
DffbO54788 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
DffbO54788 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
DffbO54788 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
DffbO54788 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.28□□□□□ -0.12
DffbO54788 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
DffbO54788 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
DffbO54788 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DffbO54788 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DffbO54788 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DffbO54788 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DffbO54788 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DffbO54788 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DffbO54788 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
DffbO54788 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
DffbO54788 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms