Protein–RNA interactions for Protein: O54786

Dffa, DNA fragmentation factor subunit alpha, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffaO54786 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
DffaO54786 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DffaO54786 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
DffaO54786 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DffaO54786 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
DffaO54786 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
DffaO54786 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
DffaO54786 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.42■□□□□ 0.38
DffaO54786 Gm10252-201ENSMUST00000209541 832 ntBASIC17.42■□□□□ 0.38
DffaO54786 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DffaO54786 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DffaO54786 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DffaO54786 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
DffaO54786 Haglr-201ENSMUST00000100000 2085 ntBASIC17.42■□□□□ 0.38
DffaO54786 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DffaO54786 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.42■□□□□ 0.38
DffaO54786 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DffaO54786 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DffaO54786 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
DffaO54786 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DffaO54786 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
DffaO54786 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
DffaO54786 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
DffaO54786 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
DffaO54786 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DffaO54786 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DffaO54786 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DffaO54786 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
DffaO54786 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
DffaO54786 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DffaO54786 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.41■□□□□ 0.38
DffaO54786 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
DffaO54786 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.41■□□□□ 0.38
DffaO54786 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
DffaO54786 Gm7370-201ENSMUST00000219471 767 ntBASIC17.41■□□□□ 0.38
DffaO54786 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
DffaO54786 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
DffaO54786 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DffaO54786 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
DffaO54786 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DffaO54786 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DffaO54786 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.4■□□□□ 0.38
DffaO54786 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DffaO54786 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
DffaO54786 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.4■□□□□ 0.38
DffaO54786 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DffaO54786 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.4■□□□□ 0.38
DffaO54786 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
DffaO54786 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DffaO54786 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.4■□□□□ 0.38
DffaO54786 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
DffaO54786 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DffaO54786 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
DffaO54786 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
DffaO54786 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DffaO54786 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DffaO54786 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.4■□□□□ 0.38
DffaO54786 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
DffaO54786 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
DffaO54786 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
DffaO54786 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
DffaO54786 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
DffaO54786 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
DffaO54786 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DffaO54786 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DffaO54786 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DffaO54786 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DffaO54786 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DffaO54786 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DffaO54786 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DffaO54786 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DffaO54786 Gm13559-201ENSMUST00000120476 863 ntBASIC17.39■□□□□ 0.37
DffaO54786 Mir6982-201ENSMUST00000184354 68 ntBASIC17.39■□□□□ 0.37
DffaO54786 Gm2274-201ENSMUST00000184539 609 ntBASIC17.39■□□□□ 0.37
DffaO54786 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DffaO54786 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
DffaO54786 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
DffaO54786 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DffaO54786 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
DffaO54786 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.39■□□□□ 0.37
DffaO54786 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DffaO54786 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DffaO54786 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
DffaO54786 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.39■□□□□ 0.37
DffaO54786 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
DffaO54786 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.38■□□□□ 0.37
DffaO54786 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
DffaO54786 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
DffaO54786 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
DffaO54786 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
DffaO54786 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DffaO54786 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.38■□□□□ 0.37
DffaO54786 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DffaO54786 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
DffaO54786 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DffaO54786 Gm15565-201ENSMUST00000118890 427 ntBASIC17.38■□□□□ 0.37
DffaO54786 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DffaO54786 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
DffaO54786 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DffaO54786 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms