Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Stx1aO35526 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Stx1aO35526 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Stx1aO35526 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Stx1aO35526 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Stx1aO35526 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Stx1aO35526 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Stx1aO35526 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.73■□□□□ 0.59
Stx1aO35526 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Stx1aO35526 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Stx1aO35526 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Stx1aO35526 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Stx1aO35526 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.73■□□□□ 0.59
Stx1aO35526 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.73■□□□□ 0.59
Stx1aO35526 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Stx1aO35526 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Stx1aO35526 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Stx1aO35526 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Stx1aO35526 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Stx1aO35526 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Stx1aO35526 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.73■□□□□ 0.59
Stx1aO35526 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Stx1aO35526 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Stx1aO35526 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Stx1aO35526 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Stx1aO35526 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Stx1aO35526 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Stx1aO35526 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Stx1aO35526 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Stx1aO35526 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Stx1aO35526 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Stx1aO35526 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.72■□□□□ 0.59
Stx1aO35526 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Stx1aO35526 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Stx1aO35526 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Stx1aO35526 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.72■□□□□ 0.59
Stx1aO35526 Gm18666-201ENSMUST00000190039 958 ntBASIC18.72■□□□□ 0.59
Stx1aO35526 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.72■□□□□ 0.59
Stx1aO35526 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.72■□□□□ 0.59
Stx1aO35526 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.72■□□□□ 0.59
Stx1aO35526 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Stx1aO35526 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Stx1aO35526 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Stx1aO35526 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Stx1aO35526 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Stx1aO35526 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Stx1aO35526 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Stx1aO35526 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Stx1aO35526 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Stx1aO35526 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Stx1aO35526 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Stx1aO35526 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Stx1aO35526 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Stx1aO35526 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.71■□□□□ 0.59
Stx1aO35526 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Stx1aO35526 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Stx1aO35526 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Stx1aO35526 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Stx1aO35526 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Stx1aO35526 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Stx1aO35526 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Stx1aO35526 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Stx1aO35526 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Stx1aO35526 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Stx1aO35526 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.7■□□□□ 0.58
Stx1aO35526 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.7■□□□□ 0.58
Stx1aO35526 Gm9731-201ENSMUST00000209480 747 ntBASIC18.7■□□□□ 0.58
Stx1aO35526 Gm10602-201ENSMUST00000098239 609 ntBASIC18.7■□□□□ 0.58
Stx1aO35526 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Stx1aO35526 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Stx1aO35526 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Stx1aO35526 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Stx1aO35526 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Stx1aO35526 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Stx1aO35526 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Stx1aO35526 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Stx1aO35526 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Stx1aO35526 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stx1aO35526 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.69■□□□□ 0.58
Stx1aO35526 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Stx1aO35526 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Stx1aO35526 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stx1aO35526 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Stx1aO35526 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stx1aO35526 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stx1aO35526 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Stx1aO35526 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stx1aO35526 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stx1aO35526 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Stx1aO35526 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.69■□□□□ 0.58
Stx1aO35526 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.69■□□□□ 0.58
Stx1aO35526 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.69■□□□□ 0.58
Stx1aO35526 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stx1aO35526 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Stx1aO35526 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stx1aO35526 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stx1aO35526 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stx1aO35526 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.69■□□□□ 0.58
Stx1aO35526 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stx1aO35526 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms